Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0392 |
Symbol | |
ID | 5054709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 343504 |
End bp | 343923 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640467959 |
Product | PilT domain-containing protein |
Protein accession | YP_001152646 |
Protein GI | 145590644 |
COG category | [R] General function prediction only |
COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATGTT TGATTGACAC CTCTGTCCTA GTCCACTCCA TATTAACAGG CGACCTCTCT GAAATAAAAA GCGTAGAGGG GGCGGTGCCG CTTGTCGCGC TGGAAGAGGC TATGTACATC CTTATACGTG TCTCTGCCAA GGAGGCCGGG CGCGGGGGTT TTTACGAGGC GAAGAGGGCA TTTGAACAAG GCGAGCTAAA CCTAGCATGG AGGCGAATTA GAGTTCTGAA TAAACTTGCA CAGCTTCTAG GCGTCGTGGA GCACAAGGCT GAAGACGTAG AGAGGGCAAA GCAAATTATG GCAAGGTACG GCCTTCTGCC AAACGACGCG CTTATCGCAG CCACAGCCCT GCGGCTGGGA TACGGGCTTT TGACCAAAGA TTCCGATTTC AAAAAAGTAG AAGAGTTAAC TCTCTGCTGA
|
Protein sequence | MKCLIDTSVL VHSILTGDLS EIKSVEGAVP LVALEEAMYI LIRVSAKEAG RGGFYEAKRA FEQGELNLAW RRIRVLNKLA QLLGVVEHKA EDVERAKQIM ARYGLLPNDA LIAATALRLG YGLLTKDSDF KKVEELTLC
|
| |