Gene Pars_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0387 
Symbol 
ID5055563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp336124 
End bp336771 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID640467954 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001152641 
Protein GI145590639 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCTCC AAACTACGAG GAGGGAAGTG CTTAAAGCCG CTACAGTTGC GGCAATTACG 
CTGGCTGTGC CAATTTCTGC ACAGAAGGCG GAGAGGCGCC GCTGGGCGAT GTACATCGAT
GTCAATAAGT GCTACGGCTG CTATGCGTGT ATGGTTGCCT GTGCCGCAGA AAATAACGTA
CCAGTCGGGG TGTTCCGTAC CTGGATAGAG CGCCACGTGA CAAAAGGAGG TACTGTGATC
TTTGTGCCCA AGCAGTGCAA CCACTGCGAA AACGCCCCCT GCGTCAAGCC GTGCCCAACC
GGGGCTACTT ACAAACGCGT CGAGGACGGG CTGGTGTTGG TAAACGACGA GCTGTGTATT
GGTTGCGGCG CCTGCATACA GGCATGTCCC TACGGGGCTA GGTTTTTCAA CCCGGTGAAG
GGCGTTGTGG ACAAATGCAC ATTCTGCGAA CATAGAATTT ATCAAGGCAA GCTGCCGGCG
TGTGTGGAGA CCTGCCCCAC CGGCGCGAGG GTCTTCGGCG ATTTAAACGA CCCCGAATCG
CCGGTCTCGA AAATAATTAA GGCTAATCCC ACGCAGAGGC TCAAGATACA CACCGGCGCG
GAGCCTATGA TATTCTACAA AGACCTGCCA TCGGAGGCGA ACCTATGA
 
Protein sequence
MSLQTTRREV LKAATVAAIT LAVPISAQKA ERRRWAMYID VNKCYGCYAC MVACAAENNV 
PVGVFRTWIE RHVTKGGTVI FVPKQCNHCE NAPCVKPCPT GATYKRVEDG LVLVNDELCI
GCGACIQACP YGARFFNPVK GVVDKCTFCE HRIYQGKLPA CVETCPTGAR VFGDLNDPES
PVSKIIKANP TQRLKIHTGA EPMIFYKDLP SEANL