Gene Pars_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0358 
Symbol 
ID5056159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp308325 
End bp309152 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content45% 
IMG OID640467929 
Productglycosyl transferase family protein 
Protein accessionYP_001152616 
Protein GI145590614 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.704063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCAA GAATCTCTAT AATAATCCCG TCTCTGGGCA CATCTTTTTT GGAATATTTA 
ATATCAAGTC TTAGGAGACA ATCTGCGAGG CCTTGGGAGA TTATATTAGT TATGAAAGCT
GATGAAAAAG GTTTGCTGGA AGCTGAGAGG CTCTGCAGTC GGAGCTCTCT TAACTGCTCC
GTTGTAGAGC AGAGGCGCGG TTATTTCACA ACAGCTCTCA ACATGGGTAA GAGGGAGGCA
AGAGGAGACA TAGTCGTATT CACAGATGAG GACGCAATAG CCCCTAGAAA GTGGATTGAG
AGGTACATAA AGCTACACAG CGTTTACAAA GACGCCGTCG GCATCTCCAG CAGGGACATC
TATGTAGACC TAGACTCGTT GAGGCTATTG CCTACACCTG ACGATAAGGC GTACGTGAAG
CTGTACAGGT GGATCGTGAG GCCATGGCTT GACAACCCCC ATCCACTCTT TAGGAAATAT
AGGCTGGGCA TGTACATAAC GAAAAACTTC GACATAGCCC ATGGGCCCTG CATACCCAAT
AAGACATGCT ACTCCCTGCC GTTTAGAGGC GTCAATATGA GCTTCAAAAA CGAGTATATA
CAGGATGTCT GGTTTCCCGA GCATCCAAGA CTTAAGAGAG CCCCCGGAAA CGAACAGTAC
TTCGGCATTC AGCTAGCCCT CAAAAACCTA GACTGCATAT ACACTCCAAA CAACCCGGTA
CTGCACATAC ATAGAGAAGA GAGCCTCTCA AGAACGAGCA AAGATAACAT TATGTCAGAA
TATAAAATAA TGAAGATATT GTACAGACAA TTACTAAACT CATCTTAG
 
Protein sequence
MLARISIIIP SLGTSFLEYL ISSLRRQSAR PWEIILVMKA DEKGLLEAER LCSRSSLNCS 
VVEQRRGYFT TALNMGKREA RGDIVVFTDE DAIAPRKWIE RYIKLHSVYK DAVGISSRDI
YVDLDSLRLL PTPDDKAYVK LYRWIVRPWL DNPHPLFRKY RLGMYITKNF DIAHGPCIPN
KTCYSLPFRG VNMSFKNEYI QDVWFPEHPR LKRAPGNEQY FGIQLALKNL DCIYTPNNPV
LHIHREESLS RTSKDNIMSE YKIMKILYRQ LLNSS