| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0344 |
|---|
| Symbol | |
|---|
| ID | 5054404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 297553 |
|---|
| End bp | 298806 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640467919 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001152606 |
|---|
| Protein GI | 145590604 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.828514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAGC TCTTCATATT TGCCCTAGAC GGCGTCCCCT ACGAGGTCTT CGAAGCCATG
AGAGACGACC TGCCCAACAT CGCAGAGGTT GCCGACCGGG GATCCAGGGG GGTCATGAGG
GCCGTAGACC CGCCCATAAC AGTGCCGGCA TGGGCCTCCA TGTTCACGGG AAAAGACCCC
GGCGAGCTCG GCATATACGG CTTCCGCCAC CTCAACAAAC AGACGAGAAG GAGCTACATC
GTCACGTCCC GCGAACTAAG AGAGCCCTAC ATCTGGGAGA GGCGGGGGCT ACGCTCAGTG
GTCATTGGGC TACCTCCGGG CTACCCGCCG AGGCAGTACG GCGTCTGGAT ATCCGACTTC
ATGACCCCCG AAGGGAGGTC CTGGACCCAC CCCCCAGAGC TGGCAAACAC GATCGGGCGC
TACATCTTCG ATATTGAATA CCGCACAGAC CGCAAAGACG AGGCCTTCAA GGCGCTCGTT
GAGATGACCC AGCTCAGATT CGCCGCCGCC GAGAAGCTAA TGGAATGGGC AAACTGGGAC
GTCTTCGTCC TCCACGAAAT CGGCACAGAC CGCGTCCACC ACCTCTTCCA GAAGTACTGG
GATCCAGAGC ACCCCATGTA CCAGCCGGGG AACCCCCACG AGGACAAGAT ACCGCGGTAC
TACAAGCTCA TAGACCAATT AGCGGGTAAG CTACTCAAGA AAATTCCCAA AGACGCCGAG
ATCTTGATAA TCTCCGATCA CGGGAACCAA GCCCAGAGAG GCGTCCTCGC CGTGAATCAA
ATACTAGCCG AGTGGGGGCT TGTGGAGTAC AAAGCAGAGC CACGCCGAGG AGCCGACATA
GACGAGGTGG TGGACTGGGA ACGCTCCAAG GCCTTCGCCT GGGGCGGCTA CTACGCCCGC
GTCTTCGTCA CGGCTCGCGG CGAAGAGGCA CACGACGTGA AGAAGGAGCT CAAGAAAAAG
CTCAGGACGC TAAAGGCGCC GTGGGGATAT ATACAAAACG CCGTTTACGA GCCCCGGGAG
CTCTACAGAG AGGTGAAAGG CGATGCCCCC GACCTCATGA TCTACTTCGA CTCGGTGCGG
GTCCGGCCGG TGCAGACAGT TGGATACGAA TCGCCGTGGC TGGAGGGCAA CGACCGGGGG
CCCGACGACT CGCTACACAG CTTCAACGGC TTCTACGCCG CGACTTGGGG CGACAGGAGG
AAGAAGGATT TACACGCCCT AGACGTGGCG AGCTTCGTCG AGGCGGCGCT ATGA
|
|---|
| Protein sequence | MTKLFIFALD GVPYEVFEAM RDDLPNIAEV ADRGSRGVMR AVDPPITVPA WASMFTGKDP
GELGIYGFRH LNKQTRRSYI VTSRELREPY IWERRGLRSV VIGLPPGYPP RQYGVWISDF
MTPEGRSWTH PPELANTIGR YIFDIEYRTD RKDEAFKALV EMTQLRFAAA EKLMEWANWD
VFVLHEIGTD RVHHLFQKYW DPEHPMYQPG NPHEDKIPRY YKLIDQLAGK LLKKIPKDAE
ILIISDHGNQ AQRGVLAVNQ ILAEWGLVEY KAEPRRGADI DEVVDWERSK AFAWGGYYAR
VFVTARGEEA HDVKKELKKK LRTLKAPWGY IQNAVYEPRE LYREVKGDAP DLMIYFDSVR
VRPVQTVGYE SPWLEGNDRG PDDSLHSFNG FYAATWGDRR KKDLHALDVA SFVEAAL
|
|---|
| |