Gene Pars_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0339 
Symbol 
ID5054203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp293033 
End bp293809 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID640467915 
Producthypothetical protein 
Protein accessionYP_001152602 
Protein GI145590600 
COG category[S] Function unknown 
COG ID[COG4743] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTAT TCGAGGCGTA CCGGCTGTTG GTAGAAGCGG CCTCTGCAGG CGCCGACGTC 
CGCCCCCTAG CAGAGGCCTT CAACAGAGCA CTAGCCGGAG AGCCGCTCGG CCCCGACTTC
GCCCAAGCCG CGAGGCAACT CGCTGACGAG GCGAGGCGAG CCGCGCTTCT CGGCTACATC
GCCGCGGCCG CGGCGTTGCT GGCGGTGGGG GCCGCCGCCT ACTTCCTATA CCGCTACCGG
AGGATAATCC TGGGCTGGCT CTGGCTCAAG ATATGGGGCT CCGGCTACTT GAAAAAGGGG
AATGGCGCCC CCAACACGTT GCTCTTCGAC GAGGAGGTCT CCGCAGTGGC GGCCGCAGTC
GCCGTTGTCG CCGTAGCCCT CGCAGTTGCC GTCGCGCTCA GCCCCGGCGC CGCAGAGCCC
TTCTCCGCGC TGGGCCTCCT CGGCCCCGGA GGAAAAATCG GAGGATACCC AGACGTCGTG
CAACGGGGAC AGCCCATCAC CCTCCACGCC TACGTATACA ACCACATGGG GACACCGATG
TGGTACGTGG TCTACGTAAA GGTAGACAAC TCCACGGCAG AGCCGCCGCT CCCCACGCCG
CCCCTCCTCA CCATGCAGAG GCTTCTACTC CACAACGAAA GCTGGGTCCA GCCCTTCACC
ATCTCCCTCA ACGCCACCGG GCGGCAGAGA CTCGTCCTAG AGCTATGGGC CTACTACCCA
AACGGCACCC TCGCATACAC AGGCAGGTGG AACCAGCTCT GGATAAGGGC AAAGTAG
 
Protein sequence
MDLFEAYRLL VEAASAGADV RPLAEAFNRA LAGEPLGPDF AQAARQLADE ARRAALLGYI 
AAAAALLAVG AAAYFLYRYR RIILGWLWLK IWGSGYLKKG NGAPNTLLFD EEVSAVAAAV
AVVAVALAVA VALSPGAAEP FSALGLLGPG GKIGGYPDVV QRGQPITLHA YVYNHMGTPM
WYVVYVKVDN STAEPPLPTP PLLTMQRLLL HNESWVQPFT ISLNATGRQR LVLELWAYYP
NGTLAYTGRW NQLWIRAK