Gene Pars_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0316 
Symbol 
ID5054394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp274709 
End bp275788 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID640467893 
ProductGHMP kinase 
Protein accessionYP_001152580 
Protein GI145590578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCTT TGGTGAAGGC CTCGGCTCCG GGTAGGCTAG ACTTCCTCAA CACACACCAG 
GACTACAAAG GCCTCCCAGT AGTCTCAGTG GCGGTGGATT TGCGGACAAC GGTGACCCTG
CGGAGGGGGG AAGAGTTTGA AATAACGTCT CTTAACACGG GGGAGAGGTG CCATTTCAGC
AAGCCCCTTA TAGAGGGGAG GTCTTTCTGC GATTATGTTA AGGCGGCGGT GATCTCCGTC
GAGAGGGAGG GGGTCGTGCT GAGGGGCTTC TCGGGCGAGC TTTACTCCGA TATTCCGATA
GGCGCGGGCA TGGCTAGCAG CGCGGCGATG CTCGTGGCGC TGGTGGGGGC CATGTTGAGG
CTCGCCGGGA GAGGCGCCGA TTTATACACC GTCGCAGAGC TGGCGTACAG GGCTGAGAGG
GAGGTTTTGG GAGTGCCCTG CGGCAGGTTG GACCAATACG GCTCGGCCTT CGGGAAGGTG
GCGGTAATTT ACCCCAAGCC GCCGGTGAGG GTAGAGAGGC TTGAGATGCG GGGCGGCGTC
TTCGTGGTGC TAGACAGCGG TATTAGGCAC AGCACTGCTG AGATTCACCC AAAGCGCCAG
GCGGAGCTCC AGGAGGCCGT GGAGATCCTA AGAGAGGCAC TAGGCGTAGA GAGCGAGGGC
TACTGGGACT TCCCGTGGGA GGTGCTAGAA GCCAGGAGGG GTGTTGTTGA GACGCTTCCG
CAGCCGCTTA GGGATAGGGT GCTCTTTACC TTGGAAATGC AGAAGTCGAC CGAGCGGGCG
CTTGCCTACC TGAGAGGGGC AGACGTGGAT AAGGCGCTGA GGGAGGTGGG GCGCGAGATG
CTTTACCAAC ACCACCTCCT TTCCCGGCTT TACGAGGTGT CTCTGCCCAA GCTAGACCAG
CTGGTGGAGG AGGCCGTCGC GGCCGGGGCC TACGGGGCTA AGCTCTCGGG CGCAGGCCTG
GGCGGGGTTG TAATTGCCCT TGCCCCAAAT AGAGAAGTCG CAGAGAGGGT AGGACAACTC
TCAAGCGCGG AGAGGTGGTG GGTAGTGGAG ATAGACGAGG GGCTGAGGTA TGGAGATTAG
 
Protein sequence
MEALVKASAP GRLDFLNTHQ DYKGLPVVSV AVDLRTTVTL RRGEEFEITS LNTGERCHFS 
KPLIEGRSFC DYVKAAVISV EREGVVLRGF SGELYSDIPI GAGMASSAAM LVALVGAMLR
LAGRGADLYT VAELAYRAER EVLGVPCGRL DQYGSAFGKV AVIYPKPPVR VERLEMRGGV
FVVLDSGIRH STAEIHPKRQ AELQEAVEIL REALGVESEG YWDFPWEVLE ARRGVVETLP
QPLRDRVLFT LEMQKSTERA LAYLRGADVD KALREVGREM LYQHHLLSRL YEVSLPKLDQ
LVEEAVAAGA YGAKLSGAGL GGVVIALAPN REVAERVGQL SSAERWWVVE IDEGLRYGD