Gene Pars_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0314 
Symbolrpl30p 
ID5056038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp273264 
End bp273794 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content58% 
IMG OID640467891 
Product50S ribosomal protein L30P 
Protein accessionYP_001152578 
Protein GI145590576 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01309] 50S ribosomal protein L30P, archaeal 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGG AGGCGAAGCT GATCTATCCG AGGTACGCCG TGGTGAGGCT CCGAGGCATT 
CCTACTACTC CGAGGGACAT AGCCCGCACG CTGGACCTCT TGAGGCTTCG CAGGAAGTTC
ACCATGGTTG TGGTGCCGGG TAGCCCAAGT ATTATGGGGA TGATACAGGA GGTAAACGAT
TGGGTTACCT GGGGCGAGAT AGAAGCCGAC ACCTTGGCGG AGGTGTTGAA GAAGAGGGGG
AGGATTGTGG GCGATAAGCC CTTGACGCTT GAGTATCTAA AGAAGTGGGG TTGGCAATCC
TTTGAGGAGG TGGCGTTGGC CTACGTCGCT GGCGAGATTG AGAGGCTATC GTGCGGCAGG
TATTATGCGA GGGAGGGTCA GAGACCTCCG TGCATCCCGT ACCTTAAGCC GTTTTTCAGA
CTCCACCCGC CGCGTGGGGG GCTGAATAGC GTAAAGCTAC ACTTCGCAGC AGGTGGCGAC
CTGGGCTACC GGGGGCCGCT TATAAACGAC CTCATCCGCC GCATGTTGTA G
 
Protein sequence
MMAEAKLIYP RYAVVRLRGI PTTPRDIART LDLLRLRRKF TMVVVPGSPS IMGMIQEVND 
WVTWGEIEAD TLAEVLKKRG RIVGDKPLTL EYLKKWGWQS FEEVALAYVA GEIERLSCGR
YYAREGQRPP CIPYLKPFFR LHPPRGGLNS VKLHFAAGGD LGYRGPLIND LIRRML