Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0314 |
Symbol | rpl30p |
ID | 5056038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 273264 |
End bp | 273794 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640467891 |
Product | 50S ribosomal protein L30P |
Protein accession | YP_001152578 |
Protein GI | 145590576 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01309] 50S ribosomal protein L30P, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGG AGGCGAAGCT GATCTATCCG AGGTACGCCG TGGTGAGGCT CCGAGGCATT CCTACTACTC CGAGGGACAT AGCCCGCACG CTGGACCTCT TGAGGCTTCG CAGGAAGTTC ACCATGGTTG TGGTGCCGGG TAGCCCAAGT ATTATGGGGA TGATACAGGA GGTAAACGAT TGGGTTACCT GGGGCGAGAT AGAAGCCGAC ACCTTGGCGG AGGTGTTGAA GAAGAGGGGG AGGATTGTGG GCGATAAGCC CTTGACGCTT GAGTATCTAA AGAAGTGGGG TTGGCAATCC TTTGAGGAGG TGGCGTTGGC CTACGTCGCT GGCGAGATTG AGAGGCTATC GTGCGGCAGG TATTATGCGA GGGAGGGTCA GAGACCTCCG TGCATCCCGT ACCTTAAGCC GTTTTTCAGA CTCCACCCGC CGCGTGGGGG GCTGAATAGC GTAAAGCTAC ACTTCGCAGC AGGTGGCGAC CTGGGCTACC GGGGGCCGCT TATAAACGAC CTCATCCGCC GCATGTTGTA G
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Protein sequence | MMAEAKLIYP RYAVVRLRGI PTTPRDIART LDLLRLRRKF TMVVVPGSPS IMGMIQEVND WVTWGEIEAD TLAEVLKKRG RIVGDKPLTL EYLKKWGWQS FEEVALAYVA GEIERLSCGR YYAREGQRPP CIPYLKPFFR LHPPRGGLNS VKLHFAAGGD LGYRGPLIND LIRRML
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