| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0313 |
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| Symbol | rps5p |
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| ID | 5056383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 272674 |
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| End bp | 273267 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640467890 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001152577 |
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| Protein GI | 145590575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTGT GGGAGCCTAG AACTGAGCTG GGGAGGATGG TTAAAGAGGG AAAGATAAGG
ACTATAGACG AGGTCTTCGC CAACAACTAC ATCATCAAAG AGCCGGAGAT TGTGGATATA
CTTGTGCCGG GGCTGAAGCA GGAATTGCTC AACGTGAATA TAGTCCAGAG GCAGACACAT
GCAGGGGAGA GGAGCCTCTT CCAAGCAGTA GTCGCGGTGG GCAACGAGGA TGGCTACGTG
GGAGTTGGGA TTGGCAAAGC GCGGCAGGTA AGGCAAGCCA TCGAGAAGGC GGTCAGGGAG
GCGAAGCTGA ACCTAATACC CGTGAGGCGC GGTTGCGGGT CGTGGAAATG TAGTTGCGAC
GAGCCGCATA GCGTGCCCTT CGTGGTGAAG GGTAAGTCTG GGAGTGTTGA AGTTACGCTC
ATACCAGCGC CGAAAGGCGT GGGGCTAGTG GCAGGAGATG TGGCTAAGGC TGTGCTTAGG
CTCGCAGGCG TGAAGGACGT GTGGACCCAT ACACGCGGAG ATACGAGGAC AACGCTAAAT
TTTGCACTTG CAGTGTATAA CGCGTTAAGG AACACCTATT ACTTTAAGAT ATGA
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| Protein sequence | MSLWEPRTEL GRMVKEGKIR TIDEVFANNY IIKEPEIVDI LVPGLKQELL NVNIVQRQTH
AGERSLFQAV VAVGNEDGYV GVGIGKARQV RQAIEKAVRE AKLNLIPVRR GCGSWKCSCD
EPHSVPFVVK GKSGSVEVTL IPAPKGVGLV AGDVAKAVLR LAGVKDVWTH TRGDTRTTLN
FALAVYNALR NTYYFKI
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