Gene Pars_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0311 
Symbol 
ID5054258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp271372 
End bp271851 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID640467888 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001152575 
Protein GI145590573 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA GGAGGAGGGG GATATTCAAG GGCATTGTGT TGTATTTCTT AAAATCGCGG 
CCTCTAAGCG GCTACGAGCT TCTCAAAGAG CTGAATAGGC TGAGTTCTGG GAGGTATACC
CCCTCTCCTG GTACCCTTTA CCCTCTTCTG TCATACCTAG AGGCTGAGGG GCTTATCGAG
TCTAGGGAGG CTTATGTGGG GCGGCGAAGG AAAAAAATCT ACGCGCTTAC TCCTCAGGGG
GAGGAGTACC TAGCAAGGCT TATGGAAGAT GAGGAATTTC TAGAACTTTT AAAGACCTTG
GAAAGCGGCC GAGCCGGCGG GGATTTAATG ACGGCTATAA GGGACGAGCT GGCGTACATC
GACGAGGTCT TCGACGAAGT AGAAAATGGC GATGTCGAAG TCCTAAGAGA AATGTTGGAT
TTGCTTAGGC GTCTCGAGGA GAAGGTAGAG GCCCGGCTTA GGAAGGCTCA GGGCGGGTAG
 
Protein sequence
MFRRRRGIFK GIVLYFLKSR PLSGYELLKE LNRLSSGRYT PSPGTLYPLL SYLEAEGLIE 
SREAYVGRRR KKIYALTPQG EEYLARLMED EEFLELLKTL ESGRAGGDLM TAIRDELAYI
DEVFDEVENG DVEVLREMLD LLRRLEEKVE ARLRKAQGG