Gene Pars_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0287 
Symbol 
ID5055451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp256314 
End bp257087 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID640467865 
ProductABC transporter related 
Protein accessionYP_001152552 
Protein GI145590550 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT GTGCATTTAT AAACCCATGG CAAAGACAAG ACGTGTCTCT ATCGGTGAGG 
AGCCTAACAG TGATCAGAGA TGGGACGTAT GTCCTACAAG ACGTATCCTT TGAGGCGCGC
CGGGAGTTCG TACTAGTGGC TGGGCCCAAC GGCGCCGGTA AGACTACCCT CTTCCTCGCC
GTGCTGAGCC TCGTCCCCTA CAGAGGAGAG ATATGTGTAG ACAACATATG TACAGAGGAG
AGGACGAAAA AAGTTGGGTA CGTCCCTCAG ATGCTGGCAC GAGGCTTCAA CGCCACTGTG
TGGGAGTACG TATACCTACC CGCCAAGTTC AGAAAACTAG CCGACGCCGC AACGAGAGCA
GAAGAAGCCC TAAAACTGGT CGACCTCTAT CCGTTGCGGG ACCGCCCCAT CCTCTCGCTT
TCAGGTGGCC AGCTCCAGAG AGCCGCCATC GCCAGGGCGC TTGCCACCGG TGGTGACGTG
CTCTTGCTCG ACGAGCCTCT TGCCAACGTA GACCCACAAG GCCGCATTGA GTTGATACAA
CTACTGAGAG AGCTGAAGAA GAACAGGACA ATACTCATGA CCTCCCACGA GCTGAGCATG
CCCTCGGACC TCGCCGACAA GATACTCCTC CTAAACCGCC GAGTGGTGGC CTACGGCACC
CCAGACCAGG TATTCAGCGA AGAGGTGCTG AGAAAAGTCT ACACATATGT CAGAATCGCA
AAGACGCAGT ACGGCTACGT CTGCGTCACG GAGGATTATG CCCACCCGCA CTGA
 
Protein sequence
MQRCAFINPW QRQDVSLSVR SLTVIRDGTY VLQDVSFEAR REFVLVAGPN GAGKTTLFLA 
VLSLVPYRGE ICVDNICTEE RTKKVGYVPQ MLARGFNATV WEYVYLPAKF RKLADAATRA
EEALKLVDLY PLRDRPILSL SGGQLQRAAI ARALATGGDV LLLDEPLANV DPQGRIELIQ
LLRELKKNRT ILMTSHELSM PSDLADKILL LNRRVVAYGT PDQVFSEEVL RKVYTYVRIA
KTQYGYVCVT EDYAHPH