| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0283 |
|---|
| Symbol | |
|---|
| ID | 5054836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 251311 |
|---|
| End bp | 252717 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640467861 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001152548 |
|---|
| Protein GI | 145590546 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAACCC TATCTGCCCA GCATGGGGTC GCAGAGGCGG TAATACTCTC ACTCCTCGCT
CTTTTGGCCA CGTTTGGGAG GATGGCTGTG GCTCTCTTAT TGACTGTGGC TGTGGCATAC
GCCATTGGCT ACGCCATGTT CCGATCGAGG CGCGTCGAGA CCTTTATGCT TCCCCTTCTC
GATGTTTTGC AGTCTGTGCC GATACTGGGC TTCTTCCCTC TAGCGCTTTA CTTCTTTATA
GCGCTCCTCC CCGCGGCGGG TGCGGAGCTT GCAGCCATCT TCCTCATCTT CACGTCGATG
GCTTGGAATA TAATCTTCAG CGTGTACCAG AGCTTCAAGA CGTTGCCAAG GGAGTTGCTC
GACATGTCCC GGGTATACCT CAACGAGCGG CTTGCGCTGG CCCATGTCTT CATACCGGCG
GCTCTACGGG GGGTGTACTA CAACATACCC ATATCGTGGG CGAATGCCTT CTTTTTCATA
ACGGCGTCCG AGGTCATAAC ACTGGGCACA GAGATTAAGC TGTTCGGCAT TGGGAGCCTA
GTGGTGAAGT GGTTTGACGA AGGGGATGTA TCATCCGCTC TTGTGGGTAT AGCGGTGGGC
ATTGCGGCCA ACGTCGTTCT CTACCTGACG CTGTGGAGGA GGCTCATGAG CCAAGTGCCG
CAACCGCCGG ACAAGCTGGC CGAGGCCGCG GGCCCGTGGC TTAAATACGG CGGCTACTTC
CTCGCGGCAT TTGCCATAAT CTTGCTCGGG TTCGTCCTAT ATACGGCGCT CGGGAGCACC
AACGCTGTTT TGGCAATTTC TAGGCTACCT GGGAGCTTCG TAGAGGCTTT GGCCGCGGCG
CCTTTTACAC TTGTGAGGGT ATTGGCGACG TTGGCCATAA GCGCGTTGGT GGCTCTTCTT
ACGTTACACG CCGTGGTTAG GGCCCCGCGT TTGGAGGCAG GGGTTCTTCT CGGCGTGTTG
CTGATCTCAT CGGTGCCCGC TGTGTTTTTA TACCCGCTAC TCGGCGCATT AGTGAGGGGG
GAGGCTCTGT CCGTGACGTT GCTGTTGCCA GGCGCTGTGG TCTATACCGT GCTGAACGCC
GTGGCTGCTT GGCGAGATGT GCCTCAAGAC CTGGTTAAGG CCTATCAAAT CCGCGGCAGG
CTCTACTTAA CCCAGGTGCT GATACCGGCA TCGATGCCGT ATCTGATAAC AGGGCTACTC
ACCGCCTGGG GCGGCGCGTG GAACGCCTCA ATTGTGGCTG AGCCTCTTGC CAACGTCCAC
GGTCTGGGGG GCTTAACGAC ACAAGCCGCC GACCGCGGCG ACATTTCTCT CCTAGTGGCC
ACAGTAGCGA CTATGACCCT AATCGTAGTG GCCGTGAATA GGGTGGTGTG GAGAAGGCTA
TACGAAGAGG CGGCAAAATG GCGCTGA
|
|---|
| Protein sequence | MRTLSAQHGV AEAVILSLLA LLATFGRMAV ALLLTVAVAY AIGYAMFRSR RVETFMLPLL
DVLQSVPILG FFPLALYFFI ALLPAAGAEL AAIFLIFTSM AWNIIFSVYQ SFKTLPRELL
DMSRVYLNER LALAHVFIPA ALRGVYYNIP ISWANAFFFI TASEVITLGT EIKLFGIGSL
VVKWFDEGDV SSALVGIAVG IAANVVLYLT LWRRLMSQVP QPPDKLAEAA GPWLKYGGYF
LAAFAIILLG FVLYTALGST NAVLAISRLP GSFVEALAAA PFTLVRVLAT LAISALVALL
TLHAVVRAPR LEAGVLLGVL LISSVPAVFL YPLLGALVRG EALSVTLLLP GAVVYTVLNA
VAAWRDVPQD LVKAYQIRGR LYLTQVLIPA SMPYLITGLL TAWGGAWNAS IVAEPLANVH
GLGGLTTQAA DRGDISLLVA TVATMTLIVV AVNRVVWRRL YEEAAKWR
|
|---|
| |