Gene Pars_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0278 
Symbol 
ID5054577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp248005 
End bp248298 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content55% 
IMG OID640467856 
Producttranslation initiation factor IF-1A 
Protein accessionYP_001152543 
Protein GI145590541 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.685193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT TCAGAGTTCC GGGGGAGGGT GAAATTCTAG GGAAGGTGGT GGAGATGCTG 
GGGGATGGCA GGTTTAAGGT CGTCTGCGCT GACGGCCAGA TAAGAGTGGC GAGGCTTCCG
GGCAGGCTGA GGAGGAGGCT ATGGCTAAAG GCGGGGGATT ACGTAATAGT TGCCCTCTGG
GATTTCGACA AGGAGAAGGG GGACATTGTT CACAAATACG AAAAGCGTGA CTTAGAGGAG
CTGAAGAGGC GGGGCTTTGC CGAGGCGATA GAGAGCCTAG AGTCCTACAT ATAG
 
Protein sequence
MSEFRVPGEG EILGKVVEML GDGRFKVVCA DGQIRVARLP GRLRRRLWLK AGDYVIVALW 
DFDKEKGDIV HKYEKRDLEE LKRRGFAEAI ESLESYI