Gene Pars_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0268 
Symbol 
ID5055437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp240119 
End bp241024 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID640467846 
Productradical SAM domain-containing protein 
Protein accessionYP_001152533 
Protein GI145590531 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.698085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0396119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT CGCTAAATGT AGTCCGGCCC TTCGACCCGT GGGGCAATCC CCTCTGCAGA 
TGCCCCTTTA AATACGGGCT AAACCCCTAC ACTGGTTGCG GGCACCGTTG CCTATACTGC
TACATAACCT CGTACATCCC CAATGCCTTC AGCCCCAGGC CCAAGGAAGA CCTCATTGAC
AAGGTAAGGC GCGACTTGGA GAAAATCCCC AGAGGTGCCG TCGTCTCCCT TTCCAACTCC
TCTGACCCCT ACACCCCGCC GGAGGCCCAG CTGGGACTGA CAAGGAGGGT GCTCCAGATG
CTTCTGGAGA GGGGTTACAA GGTGTTGATC GTCACCAAGT CCCCCCTAGT CTTGCGGGAC
TTAGACGTTC TGCAACGGCA CCTAGGCCGC GTCGCAGTTC AGATAACCAT AACAACCCTG
AGGGAGGACC TCGCCGCCGT CTTGGAGCCA GGCGCCCCTA GGCCCGTGGG TAGGCTGGAG
GCGGTGAGGC GACTCTCCGA GGCCGGCATA CCGGTTACAG TGAGGCTCGA CCCCATTATC
CCCCTGCTCA ACGACGACGG GGAGAACATA GAGGGGGTGG TGTCCAAGGC CGCAGAGGCG
GGGGCGAGGC ACCTCGTGGC AAGCACCTAC AAGGCTAAGC GGGACAACTT CGCCCGCCTC
GCCAAGGCCT TCCCCGACAA GGCCCCCACC TGGCGCAGGA TGTACTTCGA AGAGGGGCAG
TACTTACACG GCCAGTGGTA CGCCCCGAAA GAGTACCGGA TAAAGGTGCT GACCCGCGCC
GCGGAGGCCG CGAGGAGACA CAGCTTACAA TTTAACATAT GCAGGGAGGA GTTCGCCGAT
TTGGAGACGC CTGGAGCCTA CTGCGACGGG AGTCACATGC TGGGCGAGGC AAGCCAGCGT
ATCTAG
 
Protein sequence
MRVSLNVVRP FDPWGNPLCR CPFKYGLNPY TGCGHRCLYC YITSYIPNAF SPRPKEDLID 
KVRRDLEKIP RGAVVSLSNS SDPYTPPEAQ LGLTRRVLQM LLERGYKVLI VTKSPLVLRD
LDVLQRHLGR VAVQITITTL REDLAAVLEP GAPRPVGRLE AVRRLSEAGI PVTVRLDPII
PLLNDDGENI EGVVSKAAEA GARHLVASTY KAKRDNFARL AKAFPDKAPT WRRMYFEEGQ
YLHGQWYAPK EYRIKVLTRA AEAARRHSLQ FNICREEFAD LETPGAYCDG SHMLGEASQR
I