| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0259 |
|---|
| Symbol | |
|---|
| ID | 5056241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 228289 |
|---|
| End bp | 231972 |
|---|
| Gene Length | 3684 bp |
|---|
| Protein Length | 1227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640467837 |
|---|
| Product | reverse gyrase |
|---|
| Protein accession | YP_001152524 |
|---|
| Protein GI | 145590522 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1110] Reverse gyrase |
|---|
| TIGRFAM ID | [TIGR01054] reverse gyrase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.665057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.100628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCCGT TGGTGGTGTA CCTTCACACG TGCCCTAACT GCGGCGGGCC CATCACGTCG
GACCGCCTTG TCCTTGGGCT CCCGTGCAGA GAGTGCCTAC CTGAGGGGAC TAAGGCCGGG
TCCATTAGGG AGGTAGTGGC GGCTCTTAGG AGGAGGCGCG TCTTGAAGGG GCTGGCTTGG
GTAGATGCTT ACCTCCGCGG CTACGAGGGG TTTACAGAAT TTTTCAAAAA AGTAGTAGGC
TTCGACATGT GGGGAGCGCA ACGGCTTTGG GCCAGGAGGC TTGTAAGGGG GAAGAGCTTC
GCCATAGTGG CGCCGACGGG CTCCGGCAAG ACCACCTTCG TCTTAGTCGC CGCCCTTCAT
GTTGCTAAGG AGGGGAAGAA GGCCTTATTG ATTTTCCCCA CCTCCGCATT GGCCCACCAG
GCTTATAGAA AGCTACTGGT TTTTGCGGAG AGGGCCGGGG TCTCGGTGAG GGCACTCGCC
TACCACTCCC TTTTGTCAGA CCGCGAGAAG AAGGAGGTCT TGGACGCGGT GCAGAGGGGC
GAGTTCGACG TCTTGGTCGT CACGTCGGCT TTTCTGCCAA AATACTTCGA CATGTTGAAG
GCGTTTAAAT TCGACTTCGT CGCCGCCGAC GACGTGGACA GCATCTTGCG CGCCACAAGC
AAGAACATTG ACAGAATTCT GCGTCTCCTC GGCGTTTCCG ACTCTGTCCT GAGCACCGCC
CTGGAGGTTA TCAACATGAC AAAACAGCTG AGGAAGGCGG AGGTGGCAGG CGACCTCAAG
GAGATGGAGA GGCTTAGCCA ACAGATCGCA GAGCTTAGAG CTAAGCTCCA CGAGGAGGCG
AGGAGGCTGA GACTTGGCAT TTTCATAGCG TCCGGCGCGT TGGCCAAGGC GAGGAGGACG
CTTAGGCTTA TGCTGTTTAG AGAGATTCTG GGATTCGACG TGGGGGGCCG GGCGGAGGGA
CTTAGAAACG TTGTTGACCT ATACACAGAG GCCTCTGGCG ACGTGGTGGA GCAGGCCGTG
GAGTTGCTTA AGAGGCTTGG GCCCGGCGGT ATTGTCTATG TGCAAGACAG GGAGCTGGGA
ATGGCCATTT TGGAGAGGGC GAAGGCTGAA GGGCTGGCCG TGGAGCACTT CTTCCGCCCC
CGCCGAGGCG TGTTGGAGAG CTTTGAAAAG GGCGAGCTAG TCGCTCTCGT CGGCTTGGCC
TCCTCTAGGT CTGCGCTTGT GAGGGGGATA GACCTCCCAC ACGTCATCAG ATACGTCGTA
TTCGTCGGGG TGCCCAAGTT CAGGTTTAGG GTTAGGCTGG AGGAGTTCTC CATCCCGGCC
TATCTCACCT TCTTGTACAA CGTCCGCGCG GTGCTTGCCT CCGACTTGCG CTACAAGGCT
GACAGGCTGA TAGGCCAGCT CAAGAGGTTG GCCCCCTACG CCCTAAGCGT CCAAGAGGCG
CTGAAAAAGG CGGCGGAGGG TGCTGAGCTG AACGGGTTTG ACAAACACGC GGTCGAGGTG
GTGAAGTCGG CTGTGGAGTT TGTCAACTCC CTCTTGGAGA GGGAGGAGAT CCGCAAGGCG
ATTGAGACGT CTACCGAAAT ACGGCTCACC TACGTTGGCG GCGAGCTCTA CGTCTTGGTG
CCCGACGTCA CGACGTATAT CCAGGGCAGT GGGAGGACTT CCCGGCTGTA CGTGGGAGGC
CTCTCCAAGG GTCTGAGCGT GATGATCGTA GACGACGCCA AGGTCTTCCA GGCGCTGAGG
CGCGAGCTCA AGCTTAGATT CGACGAGGCG GAGTTCGCCC ATATAAAAGA GGTGGATCTC
GACAAGGTTT TACAGGAGAT CGACAGAGAT AGGCGCATTA TCCGGGACAT CATAGAGGGG
AGAGTGGCGC CAGAGAGGAG GAGCGTGGAG CTTATGAAGA CGGTCCTCAT GGTCGTGGAG
TCGCCCACAA AGGCGCGGAC AATCGCTAAC TTTTTCGGCA GGCCGAGCCT CCTCGTGGCA
GAGGGGGTGC CTATATACGA GGTCTCTACG GGGGACACGG TCCTCATGAT CACAGCCTCG
CTGGGCCACC TCTACGAGCT CCCAACGTCG CTTGACAGAA TAGAGGCGCG GCAGAGGGAG
ATGCTGTTGA AGTGGTTCGG CGACTTCAAG ACTGATGGCT ACGACGGGGG CCAATACGCC
GTATTGGTAA AGGAGGGGGC CTACATCCCA GTCTATAACA AGATCTGGAG GTGCCGGGGA
GGCGTATACG TAGACGATGT GGACGTGCCC CCGGAGTGCA AGCCGCTCGA CGTATTGGAG
GCGATTAGAA ACGTGGCTGT CGAGGTGGAC ACGGTGCTCA TCGGCACAGA CCCCGACTCC
GAAGGCGAGA AAATAGCCTT CGACCTCTAC GTCTCCCTAC GTCCCTATGT CCAGGACATA
AAGAGGGTGG AGTTCCACGA AGTGACGAGG AGGGCGATAA TCAACGCCTT GGCCAACCCG
CGGGAGATAA ACTTCTCCCT GGTAAAGGCA CAGATCGTGC GGAGGGTGGA GGACAGGTGG
ATAGGCTTCG GGCTGAGCAA GATACTGCAG AATAAGTTCC AAAACCCCAA CCTATCCGCC
GGGAGGGTGC AGACCCCGGT GCTGGGTTGG GTGGTGAAGA CCTACGAGGA GTCGCTGAGG
AATAGGATGT ACAACGTCGA CCTCCAGCTG GAGGAGGGAG AGCTGAGGAT ACAAATCTCC
AGAGAGGCGC TGGACGTCCT GCGCAAAAAG AAGAGAGTGG CAATCAAGCT GGCAGGCAGG
GAGGTGCGTT CTCTCAACCC GCCCCCGCCG TACACCACAG ACGAGCTTCT CAGAGACGCA
GTTGCGAGGC TCGGCCTCTC TGCAGACGCC GCGATGAGGA TAGCCCAGGA TCTCTTCGAA
AGCGGCCTCA TCACGTACCA CCGCACAGAC AGCACCCGGG TGTCTGCCGC GGGCGTGGCC
ATTGCGCGGG AGTACATAAC AAAACGGTTT GGTGAGGACC TCTTCAAGCC CAGGACGTGG
GGCGAGGAGA GGGAGGGCGC CCACGAAGCC ATAAGGCCCA CAAGGCCAAT AGACGTGGAG
GAGCTCAGAG GCCTGGTCAA CGCCGGGGTG ATCCAGCTCG CCATAAGGCC GACGAGGGCC
CATTACCAGC TCTACGACTT AATCTTCCGC CGCTTTATGG CAAGCCAGAT GGGCCCAAGC
ACAGTAGAGG TGGCGAAGTA CCAGCTGGAG ATAGACGGCT ACGTCGTGGA TATAGAGCGC
GTCGTCGGCA TAAAGGAGAT GGGATTCCAG ACTCTGTACC AAGTCTCGCG CGTAGAGCCT
GAGTTGTCCA CCGGGACAAT AGACGTGGTT ATTAAGAGGT ACCGCGTTGT GAGGAGAATA
CTCTCACAAG CTGAGGTCCT GGCGTTGATG AGGCAGAGGG GGATAGGGAG GCCTAGCACA
TATGCCCGGA TACTCCAGAT CTTGTCCAAG AGGTACTACG TCTACGTGAC GGGCCGCGCA
AAGCTCATGG TGCCGACAAA GAGGGGTATT GAGATATACC ACTACCTCGA GGAGGCTTTC
GGCCCGCTTG TGGATGAAGA GAGGACTCGG CTGATAGAAA GACACATGGA CATGATAGAG
GAGGGGAAGG CCAAATACGA CGACGTGTTA AACGAGCTGT TTACTGAGTT TAGAAAAGAG
ATACTACCCC ACCTCTCCGC CTAG
|
|---|
| Protein sequence | MVPLVVYLHT CPNCGGPITS DRLVLGLPCR ECLPEGTKAG SIREVVAALR RRRVLKGLAW
VDAYLRGYEG FTEFFKKVVG FDMWGAQRLW ARRLVRGKSF AIVAPTGSGK TTFVLVAALH
VAKEGKKALL IFPTSALAHQ AYRKLLVFAE RAGVSVRALA YHSLLSDREK KEVLDAVQRG
EFDVLVVTSA FLPKYFDMLK AFKFDFVAAD DVDSILRATS KNIDRILRLL GVSDSVLSTA
LEVINMTKQL RKAEVAGDLK EMERLSQQIA ELRAKLHEEA RRLRLGIFIA SGALAKARRT
LRLMLFREIL GFDVGGRAEG LRNVVDLYTE ASGDVVEQAV ELLKRLGPGG IVYVQDRELG
MAILERAKAE GLAVEHFFRP RRGVLESFEK GELVALVGLA SSRSALVRGI DLPHVIRYVV
FVGVPKFRFR VRLEEFSIPA YLTFLYNVRA VLASDLRYKA DRLIGQLKRL APYALSVQEA
LKKAAEGAEL NGFDKHAVEV VKSAVEFVNS LLEREEIRKA IETSTEIRLT YVGGELYVLV
PDVTTYIQGS GRTSRLYVGG LSKGLSVMIV DDAKVFQALR RELKLRFDEA EFAHIKEVDL
DKVLQEIDRD RRIIRDIIEG RVAPERRSVE LMKTVLMVVE SPTKARTIAN FFGRPSLLVA
EGVPIYEVST GDTVLMITAS LGHLYELPTS LDRIEARQRE MLLKWFGDFK TDGYDGGQYA
VLVKEGAYIP VYNKIWRCRG GVYVDDVDVP PECKPLDVLE AIRNVAVEVD TVLIGTDPDS
EGEKIAFDLY VSLRPYVQDI KRVEFHEVTR RAIINALANP REINFSLVKA QIVRRVEDRW
IGFGLSKILQ NKFQNPNLSA GRVQTPVLGW VVKTYEESLR NRMYNVDLQL EEGELRIQIS
REALDVLRKK KRVAIKLAGR EVRSLNPPPP YTTDELLRDA VARLGLSADA AMRIAQDLFE
SGLITYHRTD STRVSAAGVA IAREYITKRF GEDLFKPRTW GEEREGAHEA IRPTRPIDVE
ELRGLVNAGV IQLAIRPTRA HYQLYDLIFR RFMASQMGPS TVEVAKYQLE IDGYVVDIER
VVGIKEMGFQ TLYQVSRVEP ELSTGTIDVV IKRYRVVRRI LSQAEVLALM RQRGIGRPST
YARILQILSK RYYVYVTGRA KLMVPTKRGI EIYHYLEEAF GPLVDEERTR LIERHMDMIE
EGKAKYDDVL NELFTEFRKE ILPHLSA
|
|---|
| |