| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0239 |
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| Symbol | |
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| ID | 5054469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 214061 |
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| End bp | 214816 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640467818 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001152506 |
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| Protein GI | 145590504 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.270318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACG GAGAGGAGGA GAAGGGCAAG TGGACTCACA TTATTGAGGC CACGTGGAAG
GAGCTACAAG ACACCTCGCC TCGGTACACC CCCTACGTGA CCTACGGCTT ATTGACGGCA
AATATCTTGA TGTTCCTCGC CACGTTTGGC GCAATGTCAA ACGACCCGTG GAGCGTCGGC
TTGACTGCGT CTGAGTTTAT TGAAAACCCC CTGGCGCCGA AGGTGTTGCT CTCAATGTTC
GCCCACGCCG GCATTATCCA CCTACTGGGA AACATGGCCT ATTTGTACAA GCACGGCGAC
AACGTAGAGG CAGCGATGGG GAGGCTGAGG TACCTCGTCT TCTACTTGAT CTGCGGCTAC
GCCGCCGTCG CCTCACAAGT ACTCTACTCC TCGGCAGTGG GGACGCCTAG GGTGATGCTG
GCGCCGATGG TGGGGGCGTC CGGGGCCATA AGCGGAGTCC TGGGGGCATA CCTCTACCTG
TGGCCCGGGG CCTCCACCTA CCGTTGCTTC TGCTTTCGTT TTTCCTGCTA CTGCATGAGG
CTCACCGCGC GCCGCGACAT AGCCATATGG CTTGGATTCC AGTTCGTGTT GCCAGTCTTG
GAGCCTTCTG TGGCGGTCTT CGCCCATCTC GGCGGTCTTG TGGCGGGGAT AGCTCTAGCC
CCCATCATCG CCAAGAGGGA AAACGTGGCG AGGTTAAGGC AGATGGTGAA GCAGGGGAGT
ATAGAGGCCC CCCTCCAGAC GAGTACGAAG TGTTAG
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| Protein sequence | MSDGEEEKGK WTHIIEATWK ELQDTSPRYT PYVTYGLLTA NILMFLATFG AMSNDPWSVG
LTASEFIENP LAPKVLLSMF AHAGIIHLLG NMAYLYKHGD NVEAAMGRLR YLVFYLICGY
AAVASQVLYS SAVGTPRVML APMVGASGAI SGVLGAYLYL WPGASTYRCF CFRFSCYCMR
LTARRDIAIW LGFQFVLPVL EPSVAVFAHL GGLVAGIALA PIIAKRENVA RLRQMVKQGS
IEAPLQTSTK C
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