Gene Pars_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0237 
Symbol 
ID5054880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp211869 
End bp213272 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content60% 
IMG OID640467816 
ProductV-type ATP synthase subunit B 
Protein accessionYP_001152504 
Protein GI145590502 
COG category[C] Energy production and conversion 
COG ID[COG1156] Archaeal/vacuolar-type H+-ATPase subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.177581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC CGGTGGTGTC TTACTCCACT GTGAGGGAGG TTAAGGGCCC TCTTATAGTT 
ATTGAAAAGA CTAGGGGCGT GTCCTACGGC GAGATTGGAG AGGTGGTTGG GCCAGACGGC
GAGCCGAGGA GGGTGCAAGT AATTGAGGTG GGGACGGACT ACGCCGTGGC GCAGGTGCTT
GGCGGCACCC TAGGCCTACC TGCAAGGGGC TCCACGGTGA GATTCTACGG CAAGACTCTG
AAAATCCCCG TATCGGAGCA GCTGATAGGG AGGATTCTAG ACGGGAAGGG GCAACCGCGT
GACCACATGC CCCTCCCGCC GCCGGAGGAC TTCCGCGACG TAAACGGCGA GCCGCTCAAC
CCCTACTCCA GGGAGTACCC AGAGGAGCCC ATTGAGACGG GCATATCTGC AATCGACGGC
CTCTATACCT TGGTCAGGGG GCAGAAGTTG CCCATCTTCT CAGGTACCGG CCTTCCGCAC
AACCTCATGG CGGCCCAGGT GGTGAGGCAG TCCACGGTAA GGGGTAGCGA GGAGGGGTTC
GCCGTAGTCT TCGTGGGTGT AGGCATCAAG ACGGAGGAGG CCCTCTTCTT CATGGACGAG
TTTAGGAAAA CCGGCGCCTT GAGGAGGGCC GTGGCTGTGC TCAACCTCGC CTCCGACCCG
GTGGCAGAGC GGGTCCTCGC CCCACGCGTC GGCTTGACAA TTGCCGAGTA CCTCGCATGG
CAGCTGGGGT ACCACGTCCT CGTGGTTATC ACGGACATGA CCAACTACTG CGAGGGGCTG
AGAGAGCTGT CGTCGGGCAG AGGCGAGTTG CCGGGGAGAC GCGGCTACCC CGGCTATATG
TACACCGACT TGGCTACGAT ATACGAGAGG GCCGGCAAAG CCCACGGCCG CAAGGGATCC
GTTACGCAGT TCCCCATCTT GACCATGCCC CACGACGACA TAACCCACCC CATACCAGAC
CTAACAGGAT ACATCACGGA GGGCCAGCTA GTCTTGTCAA GGGCGATGTG GGGCAAGGGA
ATATACCCGC CCTTCGACGT GATCATGTCG CTGAGCCGTC TCGCCAAAGA CGCCATCGGC
GAAGGCAAAA CCAGGGAAGA TCATAAAGAC GTCGCGAACA CCCTAATCGC GGCGTATTCA
AAGGCGCTCG AAATAAGGAA TTTGGCCACG CTGGTGGGCG AGCGCAACCT CGGCTGGCGC
GAGAGGCGCT ACCTGCGCTT CGCCGACGCC TTCGAGCAGA AGTTCATCAA GCAGGGATAC
TACGAGAGGC GCTCCTTCGA AGAGACCCTC GACATCGGCT GGGACGTCTT GTCCATTCTG
CCCGAGGACG AGCTCACCAA CGCCAGGCCC CAGATAACCC AGAAGTTCTA CAGACGTCAC
GTTTACGAAT CGGTCCAACT CTAG
 
Protein sequence
MLTPVVSYST VREVKGPLIV IEKTRGVSYG EIGEVVGPDG EPRRVQVIEV GTDYAVAQVL 
GGTLGLPARG STVRFYGKTL KIPVSEQLIG RILDGKGQPR DHMPLPPPED FRDVNGEPLN
PYSREYPEEP IETGISAIDG LYTLVRGQKL PIFSGTGLPH NLMAAQVVRQ STVRGSEEGF
AVVFVGVGIK TEEALFFMDE FRKTGALRRA VAVLNLASDP VAERVLAPRV GLTIAEYLAW
QLGYHVLVVI TDMTNYCEGL RELSSGRGEL PGRRGYPGYM YTDLATIYER AGKAHGRKGS
VTQFPILTMP HDDITHPIPD LTGYITEGQL VLSRAMWGKG IYPPFDVIMS LSRLAKDAIG
EGKTREDHKD VANTLIAAYS KALEIRNLAT LVGERNLGWR ERRYLRFADA FEQKFIKQGY
YERRSFEETL DIGWDVLSIL PEDELTNARP QITQKFYRRH VYESVQL