Gene Pars_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0223 
Symbol 
ID5056334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp200557 
End bp200859 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content55% 
IMG OID640467802 
Producthypothetical protein 
Protein accessionYP_001152490 
Protein GI145590488 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TGGTTGTTAG CTTCTCGGTG GTGCCTATTG GGACGGGCTC TCCCAGCGTA 
TCTAAATACG TGCAGAGGGC GACGCAGGTT ATTAGGGAGA TGGGACTGAA GTATCGGACC
GGCGCCGGCT TCACTGACGT TGAGCTGGAC TCCTACGCCC AGCTGGCCGA GCTTCTGCAG
AGGATAGAAA GGGCTCTGGC GGAGATGGGG GCCCAGCGCA TCCTCTACAC CATAAAGATC
GACAGGCGGT TTGACAAGGA GCTGTACATA GAGGAGAAGG TACAGAAGGC GGAAAAGATA
TAA
 
Protein sequence
MAKMVVSFSV VPIGTGSPSV SKYVQRATQV IREMGLKYRT GAGFTDVELD SYAQLAELLQ 
RIERALAEMG AQRILYTIKI DRRFDKELYI EEKVQKAEKI