| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0217 |
|---|
| Symbol | |
|---|
| ID | 5054198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 195643 |
|---|
| End bp | 196704 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640467796 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001152484 |
|---|
| Protein GI | 145590482 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.896474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAG CAGAGACCAT GGACGTTCCC AGCAGGAGTT ATATTGAAGA TCTACTGAAG
GCGGACTTGT GGGAGCTTGG GAGGAGGGCT TACGAGATCA GGACGAGGCT ATATGGGGAC
TTAGCCACCT TCATACCAAA CATGGTCCTG AACTACACAA ACGTCTGCGT TGTCGGGTGC
TCCTTCTGCG CCTTCTACCG CCCGCCCCGC CACCCGGAGG CGTATGCGTA CTCTGTGGAG
GAGGCCGTGA AGAGGGTCCT CGCCGTAGAC GCGAAGTACG GCATTAGGCA GGTTTTAATA
CAGGGCGGGG TCAACCCCGA AATCGGCATT GAGTACTTCG AGGAGCTGTT CCGCGCCATC
AAGGCCAAGG CGCCGCACAT CGCGATCCAC GCCCTGTCTC CTCTGGAGGT GGAGTACCTC
GCGAGGCGGG AGAGGGCCAC TTACAGGGAG GTGCTGGAGA GGCTTAAGGC GGCGGGGATG
GAGTCTATGC CAGGGGGCGG CGGGGAGATC CTCGTCGACG ATGTCAGGAA GATCATAGCG
CCGAAGAAGA TCGACAGCGA TACTTGGCTC CGGATTATGG AGGAGGCGCA TAAGGCCGGC
ATCCTGTCCT CGGCGACGAT GATGTATGGC CACGTGGAGA CGCCCAGCGA CATAGCAGAG
CACATGTACA AAATCGCCCA GCTCCAGGCC AAGACCGGCG GCTTCGTGGC GTTCATCGCG
TGGAACTTCG AGCCCGGGAC GAGCGAGCTT GGGAAGAAGA TCCCATACCC CAAGACCTCG
GCCACCCTGC TGAGGATGGT CGCCGTAGCC CGCATAGTGT TCAACGGCCT CATCCCCCAC
ATACAGGCCG GGTGGCTCAC CACAGGCCCC GAGACCGCCC AGCTGGCGCT GTATTTCGGC
GCCGACGACT TCGGTGGGAC CCTCTACGAA GAGAAGGTCT TGGAGTGGGT AAGGGCAGAG
GCCCCCATCG ACAGGAAGAC AGACGTCGTC AACATTATCC GAGACGCCGG GTTTAGGCCG
GCGGAGCGGG ACAACCTCTA CAGGGCTGTG GCCTACTACT AA
|
|---|
| Protein sequence | MLKAETMDVP SRSYIEDLLK ADLWELGRRA YEIRTRLYGD LATFIPNMVL NYTNVCVVGC
SFCAFYRPPR HPEAYAYSVE EAVKRVLAVD AKYGIRQVLI QGGVNPEIGI EYFEELFRAI
KAKAPHIAIH ALSPLEVEYL ARRERATYRE VLERLKAAGM ESMPGGGGEI LVDDVRKIIA
PKKIDSDTWL RIMEEAHKAG ILSSATMMYG HVETPSDIAE HMYKIAQLQA KTGGFVAFIA
WNFEPGTSEL GKKIPYPKTS ATLLRMVAVA RIVFNGLIPH IQAGWLTTGP ETAQLALYFG
ADDFGGTLYE EKVLEWVRAE APIDRKTDVV NIIRDAGFRP AERDNLYRAV AYY
|
|---|
| |