| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0172 |
|---|
| Symbol | |
|---|
| ID | 5054330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 156272 |
|---|
| End bp | 157768 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640467751 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001152439 |
|---|
| Protein GI | 145590437 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.329648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCTGG TTAAAGTTTT AAATACAAAA ATGTGGGCAC ATATGCGTAA CATTCCTATC
AACAGGGTAT CTGACTACAT CTGGGAAATC CCAGCCGGAG TAAAGCCTTG TCAGAAGGTG
CCCGTGAGGA TCTACGCAGA CTCCGTACTG CTGGAGAAAA TGAAAACTGA CATGACCCTA
GAGCAGGGCA TCAACGTCGG GTGTCTTCCC GGCATTTATA AGTGGTCAAT TGTGCTCCCC
GACGCGCACC AGGGCTACGG CTTTCCCATT GGAGGTGTCG CCGCCATTGA CGCCGAGGAG
GGCGTAATCA GCCCTGGGGG CATCGGCTAC GACATCAACT GCGGTGTGAG GGTGCTTAGG
ACAAACCTCA CGGAGCAGGA GGTTAGGCCA AAGCTTAAGG AGCTGGTGGA CACGATCTTC
CGCCTCGTGC CGCCCGGGGT TGGAGGAACC GGCCATCTGA GGCTATCGCC TGGCGAGTTC
GAACGTGTTT TGGCGGAGGG GGTGGAGTGG GCGGTGCAGA AGGGCTACGG CTGGGCTGAG
GACATGGAGT ACATAGAGGA GAGGGGGTCT TGGAAGCTGG CCGACCCGTC TAAGGTCTCG
GAGAAGGCCA AGGCGAGGGG GAGGGACCAG CTGGGCACCC TGGGGTCTGG CAATCACTTC
TTGGAGATAC AGGTGGTGGA CAAGATATAC GACGAGAAGG TGGCCAAGCT CTTCGGCATA
GAGAGGGAAG GCCAGGTAGT GGTAATGATC CACACGGGGA GCAGAGGCTT CGGCCACCAG
GTGGCGACGG ACTACCTCTT GATCATGGAG AGGAAAATGA GGCAGTGGGG GCTAAACCTG
CCAGATAGGG AGCTGGCTGC AGCGCCGCTT AAGGACAAGG TGGCGGAGGA CTACATCAAG
GCCATGGCAT CTGCGGCTAA CTTCGCCTGG ACGAACCGCC ACATCATCAT GCACTGGGTG
AGGGAGGCGT TTAAGAAGGT GTTCGGCTCT ATTGAGAAAG TTGGTCTGGA GATAGTATAC
GACGTGGCTC ACAACATCGC CAAGCTGGAG GAGCACGTCG TGGACGAGAA GGGCACTGTT
AAGAAGGTGT GGGTCCACCG CAAGGGCGCC ACTAGGGCCT TCCCGCCCGG CAGGCCGGAG
ATCCCGGCGA AGTACAGAGA GGTAGGCCAG CCGGTGCTGA TCCCCGGCTC TATGGGCACA
GCCTCGTGGA TCCTCGTCGG CACTCACGAT TCCATGAGGC TGACCTTCGG CACTGCGCCC
CACGGCGCTG GGAGGGTGCT CAGCCGCGAA GCCGCCATTA GGATGTACCC GCCGCACAAG
GTGCAGGAGG AGATGTCCAA GAGGGGGATA ATAGTCAGGT CTGCTGAGAC CGAGGTGATA
AGCGAAGAGG CGCCTTGGGC CTACAAGGAC GTGGACCGCG TAGTCGAAGC CGCCCACCAA
GTAGGATTTG CTAGGAAAGT GGTCAGGCAG AGGCCTATAG GAGTAGTAAA GGGCTAA
|
|---|
| Protein sequence | MCLVKVLNTK MWAHMRNIPI NRVSDYIWEI PAGVKPCQKV PVRIYADSVL LEKMKTDMTL
EQGINVGCLP GIYKWSIVLP DAHQGYGFPI GGVAAIDAEE GVISPGGIGY DINCGVRVLR
TNLTEQEVRP KLKELVDTIF RLVPPGVGGT GHLRLSPGEF ERVLAEGVEW AVQKGYGWAE
DMEYIEERGS WKLADPSKVS EKAKARGRDQ LGTLGSGNHF LEIQVVDKIY DEKVAKLFGI
EREGQVVVMI HTGSRGFGHQ VATDYLLIME RKMRQWGLNL PDRELAAAPL KDKVAEDYIK
AMASAANFAW TNRHIIMHWV REAFKKVFGS IEKVGLEIVY DVAHNIAKLE EHVVDEKGTV
KKVWVHRKGA TRAFPPGRPE IPAKYREVGQ PVLIPGSMGT ASWILVGTHD SMRLTFGTAP
HGAGRVLSRE AAIRMYPPHK VQEEMSKRGI IVRSAETEVI SEEAPWAYKD VDRVVEAAHQ
VGFARKVVRQ RPIGVVKG
|
|---|
| |