| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0138 |
|---|
| Symbol | |
|---|
| ID | 5055745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 126196 |
|---|
| End bp | 127140 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640467717 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001152405 |
|---|
| Protein GI | 145590403 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | [TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.649091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGC AACAACTAGT CAAGAGAACC CCCGCCGACT ACCGCTGGAT AAGGCCGCCC
GAGTGGTGCC CAGGGTGTGG ACACTTCGGA GTTTTGCAGT CTTTATACAA TGCATTTGCT
GAGCTGAACT TAGACCCATC AAAAATAGTA CTAGTATCTG GAATCGGCTG CTCTTCCCGA
TTACCTCATT TTGTCAGAAC CACCAGCGTG CACGCCATTC ACGGAAGGGC TATCCCCTAC
GCCCTGGGGA TAAAACTAGC CAACCCCAGC CTAGAGGTGG TCGTCGTGGG TGGCGATGGC
GACCTTATGG CTATCGGAGG CAACCACCTG CTACACCTGG GCAGGAGAAA CGTCGACATA
ACCGTGATAT TGATGGACAA CTCGGTATAT GGACTGACAA GGGGGCAGGC AGGACCTACC
CTGCCGCCGG GTCTCAAAGT AAAGGCGATT CCTAAAGCTA ATCCACAGGG CGAGATAAAC
CCATTGCTCC TCGCCCTCAC CGCCGGCTTT ACGTTCATCG CACGCGGCTA TTCATACGAC
ATTAAGTACA CCACGAAGCT TATTGTCGAG GCAATTAGGC ACAAGGGCTC CGCCTTTGTG
CAGGTCTACA GCCCATGCGT GACGTACAAC AACATAATGA CGAGAGAGTG GTACGAGAAG
AGGATCTACA AGCTAGAAGA GGCAGACCCC TCTTGGGATC CCGTAGTGCA CGACGAGAAG
GAAGTCGACA CAAAGATTAG AAAAGCCCTG GACAAAATAG TGGAACGCGA CAGGCTACCC
CTAGGCATAT TCTACAAAAA CGAGCTCGTC CCCACCTTCG AGGAGCGCTA CGAGAGCATA
TACGACCCCA ACTACAGGGC TCTACCGCCT GCCCTCCAAC CAATCGAGGT AGACGGAAAG
CCCGTCGTCG ACTTCGAAAA ACTCATCGCA GACAAGATAT TGTAA
|
|---|
| Protein sequence | MTMQQLVKRT PADYRWIRPP EWCPGCGHFG VLQSLYNAFA ELNLDPSKIV LVSGIGCSSR
LPHFVRTTSV HAIHGRAIPY ALGIKLANPS LEVVVVGGDG DLMAIGGNHL LHLGRRNVDI
TVILMDNSVY GLTRGQAGPT LPPGLKVKAI PKANPQGEIN PLLLALTAGF TFIARGYSYD
IKYTTKLIVE AIRHKGSAFV QVYSPCVTYN NIMTREWYEK RIYKLEEADP SWDPVVHDEK
EVDTKIRKAL DKIVERDRLP LGIFYKNELV PTFEERYESI YDPNYRALPP ALQPIEVDGK
PVVDFEKLIA DKIL
|
|---|
| |