Gene Pars_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0133 
Symbol 
ID5055581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp119927 
End bp121225 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content61% 
IMG OID640467712 
Producthypothetical protein 
Protein accessionYP_001152400 
Protein GI145590398 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC CCTGCTTGGT ACATATTAAT AGGCGGTCGC TCATGGCAAC CGTGCTGGTG 
CTCATAGGCA TCGACGACAC GGACAGCTAT ACAGGTGGGT GCACCACCCA CGTGGGCTAC
CTATTAGCAA AAGAGGTGCT GAGGAAGTGG GGGGAAGAGG CGTTTCTGGA TTTCCCCCGC
CTCGTTAGGC TGAACCCCAA CATCCCGTTT AAGACTAGGG GAAACGCCGC AGTGGCGCTT
GCGCTGGAGG TGCCGGAGGG CGACGTGGAG GAGGTGTGGA GGCTCGCCTT GGACGTTGTT
AAGAACAACG CAAGGCGAGA GGGCAAGACA GACCCGGGCC TCGCAATGGC TGTGAGGGAG
GTGCCGAAGA GGGCGCGTGT GATCTACAAA ATGGCCTTGA CGCAGGTGGT GAGCAGAAGC
GCCGCGGAGA GGGCTGGGCT GATTACCTGG GGCGGCCGCG GCGTTGTGGG GGCAGTAGCG
GCAGTTGGGG CCGACTTGTC TAGATCCACC TTTGAGCTGA TTGCATACCG CGAGGGGGAG
CGCGCGGCTA TCCCCGCCGA GGTTGTGAGG CTGATGGAGG CGCTGACGTA CCCCTTCACC
TTCCACAACT TAGACGGCAG GCGGGTCCTA ATCCAGCCAA GGGGGCCGGA CCCCGTGTAC
TACGGCATAA GAGGTCTTTC CCCTCCCCAT CTGCTACTCG CCCAGAGCAT CCTCGAAGCC
CACGGCTACA AGCCCGCCGG CTGGGTGATA TACCGCACCA ACCAGGCGAC AGACGCACAT
CTTGCACATG GGGTAATCCT GGCCGAGCCA ACCCCATACT CCTACTACCG TGTCAGGGGC
GTTGTGGTCG AGGCCAGGAG GGTGGCGGGA AGGCACGTGG TGGGTAGGCT AGACAACGGG
TTGGCGTTCG TGGCGTATAG ACACTTAGGG AGGCTGGCGA GCGAGCTGGA GAGGTGTGTT
ATGTGCGACG TGGAGCTGTA CGGCGGCCTC AAGCCTAGGT TCGGCCAACT ATTTCTCTAC
GTAGAGCGGG CATACGTCTT GGGGAGGTAC GCCCCGTCGC CTTCCCGCTG TCCCTACTGC
TGGGGGTCGC TAGAGAGCTT GGGAAGGGAC AGGGGGTGGA GGTGCCGCCG CTGCGGCGTT
GTGTTCAGGA GCAGAGAGGT GAGGTGGCTC TACGACAGCT CGATCGCGAA GGCAGTCTTC
CCTAGACCAG GGGAGTGGAG ACACCTATTA AGGCCCCCGG ACCTGGACGT TGAGGTGGCC
GGTTTCTTCT CGCCTAGATC TGTGGAGTGG ATTAGCTAA
 
Protein sequence
MSEPCLVHIN RRSLMATVLV LIGIDDTDSY TGGCTTHVGY LLAKEVLRKW GEEAFLDFPR 
LVRLNPNIPF KTRGNAAVAL ALEVPEGDVE EVWRLALDVV KNNARREGKT DPGLAMAVRE
VPKRARVIYK MALTQVVSRS AAERAGLITW GGRGVVGAVA AVGADLSRST FELIAYREGE
RAAIPAEVVR LMEALTYPFT FHNLDGRRVL IQPRGPDPVY YGIRGLSPPH LLLAQSILEA
HGYKPAGWVI YRTNQATDAH LAHGVILAEP TPYSYYRVRG VVVEARRVAG RHVVGRLDNG
LAFVAYRHLG RLASELERCV MCDVELYGGL KPRFGQLFLY VERAYVLGRY APSPSRCPYC
WGSLESLGRD RGWRCRRCGV VFRSREVRWL YDSSIAKAVF PRPGEWRHLL RPPDLDVEVA
GFFSPRSVEW IS