Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0089 |
Symbol | |
ID | 5054298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 81366 |
End bp | 82361 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640467668 |
Product | H/ACA RNA-protein complex component Cbf5p |
Protein accession | YP_001152356 |
Protein GI | 145590354 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative [TIGR00431] tRNA pseudouridine 55 synthase [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTGCA GTCAGAGAGA GGTTTTCGTC AAGAGGGAGG AGCCTACAAA TCCTGAGTGG GGTAAGCCGC CCTCCCAGAG AACTGCTGAC GAGTATATAC GGCACTCATT TGTGATTTTA GACAAGCCTC GGGGGCCTAG TAGCCACGAG GTGGCGGCGT GGGTGAAGAA GATTCTGGGC GTGGAGCGGG CCGGCCACGC GGGGACGCTG GACCCGAAGG TGTCGGGGGT GTTGCCAATT GCAGTGGCTG AGGGGACTAA GGTGTTGATG GCCCTGTCTA GATCCGACAA GGTCTATGTG GCTGTGGCTA AGTTCCACGG AGATGTGGAT GAGGAGAGGC TTAGGGCTGT GTTGCGGGAG TTTCAGGGAG AGATATACCA AAAGCCGCCG CTCCGCTCTG CGGTGAAAAG GCAGTTGCGG ACGCGTCGGG TTTTCTCGCT TGAGCTTCTA GAGTTGGAGG GGCGGTATGC CGTTATTAAG ATGCATGTTG AGGCTGGGAC ATACGCCCGC AAGATTATAC ACGACATCGG CGAGGTTCTC GGCGTAGGCG CCAATATGAG AGAGTTGAGG CGCGTGGCAG TCACCTGCTT TACTGAAGAC GAGGCTGTTA CTTTGCAAGA CGTGGCCGAC GCGTATTATA TCTGGAAGAA ATACGGCGAC GACACGTATC TAAGGAGCGT CCTGTTGCCT ATTGAGGAAA TTGCCAGGCA TTTGCCGAAG ATTTGGGTAA GGGACAGCGC CGTAGACGCC GTGTGCCACG GCGCACCTCT AGCTGCGCCG GGCATATCGA AGTTCGAGGT GCCGTTTTCC AAGGGGGACA TAGTCGCCAT GTTTACTCTG AAAGGCGAGC TTGTAGGGAT TGGTAGGGCT CTGGTAGACT CGGAGGAGGT GAAGAAAATG GAGAGGGGGG CCGTGGTTAG GACAGACAGG GTCGTCATGA GGCGGGGCAC ATATCCGGCT ATGTGGAAGA AAGGCCAAAG AGCCGCAAAA ACTTAA
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Protein sequence | MRCSQREVFV KREEPTNPEW GKPPSQRTAD EYIRHSFVIL DKPRGPSSHE VAAWVKKILG VERAGHAGTL DPKVSGVLPI AVAEGTKVLM ALSRSDKVYV AVAKFHGDVD EERLRAVLRE FQGEIYQKPP LRSAVKRQLR TRRVFSLELL ELEGRYAVIK MHVEAGTYAR KIIHDIGEVL GVGANMRELR RVAVTCFTED EAVTLQDVAD AYYIWKKYGD DTYLRSVLLP IEEIARHLPK IWVRDSAVDA VCHGAPLAAP GISKFEVPFS KGDIVAMFTL KGELVGIGRA LVDSEEVKKM ERGAVVRTDR VVMRRGTYPA MWKKGQRAAK T
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