Gene Pars_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0060 
Symbol 
ID5055153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp46684 
End bp47211 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content51% 
IMG OID640467640 
ProductFHA domain-containing protein 
Protein accessionYP_001152329 
Protein GI145590327 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.399884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTGC GCAAGTTGCT GAAGCCCGCC GCAAACTATC TAAGTTTTTT AACCTTATAT 
TTTGAATGGG CGATGCCCTG GCGCTGTCCT GTATGCGGAA CCGAGAATAG AGACGAAGCG
TTGACGTGTA GGGTTTGCGG GGCTTACAAG CCAGAGGCAA CTACGAAGAG GTTGCAAGTG
GCGAAGGAGA CGGCTCTGCC GTATGTTGTG GTGTCTGTAG AGGTTTTGGA AAGCCCTGTC
GAGTCGCTTG TGGGAAAAAA GTTCGAATTC ATGATTGAGG CGACAGGCGC GATAGTAACG
GTGGGGAGGG CAGTGGATAA CCAAGTGGTT ATTCCCGACC CCACTGTGTC TAGAAGACAT
CTGAGACTTA TCGTGACATC TAACGGGATT GTGGTAGAAG ATCTCGGGAG TAGCAACGGC
ACGTTTTTGC TAGAAGGCGG ATCAGAACGT AGGGTTAGGG CTGAGAACGT CGGGAGGCAA
GCACTAATCA GAATTGGACA TACTAAGCTT AGGCTAACCC TATCCTGA
 
Protein sequence
MWLRKLLKPA ANYLSFLTLY FEWAMPWRCP VCGTENRDEA LTCRVCGAYK PEATTKRLQV 
AKETALPYVV VSVEVLESPV ESLVGKKFEF MIEATGAIVT VGRAVDNQVV IPDPTVSRRH
LRLIVTSNGI VVEDLGSSNG TFLLEGGSER RVRAENVGRQ ALIRIGHTKL RLTLS