Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0048 |
Symbol | glyA |
ID | 5056210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 36523 |
End bp | 37812 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640467628 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001152317 |
Protein GI | 145590315 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCCA AAGAGCTGGA AGAGATAATC GACGTAGTAC TGGTGCACAA CAACTGGCGG CGTAGGGAGA CCATAAACCT CATTGCAAGC GAAAACGTCA TGTCGCCTCT TGCCGAGTTG GTATACCTAA ACGACATGGC GGGGAGATAC GCGGAGGGGA CCGTGGGCAA CCGGTACTAC CAAGGCACGA AGTATGTAGA CCTGATAGAA GACGTGCTTA CGAAACGATT TGCCAAAGCC TTGGGGGCCA CCTACGTGGA CGTCCGGCCT GTCTCGGGCA CTGTGGCGAA CCTGGCGACT TACTTCGCGC TAGTCCCCGA GGGCGGCGTG GTGGCGTCGT TGCCTGTGAA ATACGGCGGC CACATCAGCC ACAACACCGT GGGGGGACTA AAGGCCTTGA GGCTGAAAAT GGTCGAACTA CCCTGGGATC TCGACCGCTT TAATATAGAC GTTGACCGCG CCCGCAAGGT CATAGAGGAG GCCAAGCCCA ATTTGGTAAT ACTGGGGGGC TCCCTCTACT TGTTCCCCCA CCCGATTAGA GAAATTGCAG AAATAGCCAA GGCCAGCGGC GCCTATGTGC TCCACGACTC AGCCCACGTC TTTGGCCTAA TCATCGGCGG CGTCTTTCCA AACCCGCTAA AGGAGGGGGC CCACGTAATT ACTACGTCTA CACACAAGAC TTTCCCAGGG CCGCAGGGCG GCCTCATAGC CGCCGTGGTT GAGGATAAGG TAAACGATCT CCAGAGAGCA GTCTTCCCGG TATTCACGTC AAATTACCAC CTCCACCGCT ACGCCGCCAC CTACGTGACC CTAGTCGAGA TGGAGCACTT CGGCGCTGAG TACGCCAGAA GGGTGGTGGA GAACGCGAGG GCTTTGGCCG AGGCGTTGGC GGAGCAGGGC GTGCCGCCCG TGGCAGAGGC GCTTGGCTAT ACAAGGACGC ACCAAGTTGC TGTCGACGTA TCCAAATTCG GAGGTGGGGA CAAAGTGGCA GCTAAGCTGG AGGAAGCGAA CATAATCGTT AACAAAAATG CCCTCCCTTG GGACAAAAGC GTTTTGAAGC CAAGCGGCAT AAGGCTGGGG GTACAGGAGA TGACCCGCTT CGGCATGGGC AAAGACGAGA TGCGGGAAAT CGCAAAGTTC ATTGCAAGGG TGCTGAGCGG CGAGGACCCC GCCGGCGTCA GGCGCGACGT TGCGGAGTTC AGAAAGGCGT ATCTGGAGAT CAAATACGGG TTTAAAATTG ACCGGGAATT AGTGGATAAG GTATTCAAAT CGCTTAGTCT ATATACATAG
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Protein sequence | MLPKELEEII DVVLVHNNWR RRETINLIAS ENVMSPLAEL VYLNDMAGRY AEGTVGNRYY QGTKYVDLIE DVLTKRFAKA LGATYVDVRP VSGTVANLAT YFALVPEGGV VASLPVKYGG HISHNTVGGL KALRLKMVEL PWDLDRFNID VDRARKVIEE AKPNLVILGG SLYLFPHPIR EIAEIAKASG AYVLHDSAHV FGLIIGGVFP NPLKEGAHVI TTSTHKTFPG PQGGLIAAVV EDKVNDLQRA VFPVFTSNYH LHRYAATYVT LVEMEHFGAE YARRVVENAR ALAEALAEQG VPPVAEALGY TRTHQVAVDV SKFGGGDKVA AKLEEANIIV NKNALPWDKS VLKPSGIRLG VQEMTRFGMG KDEMREIAKF IARVLSGEDP AGVRRDVAEF RKAYLEIKYG FKIDRELVDK VFKSLSLYT
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