Gene Pars_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0024 
Symbol 
ID5055149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp16600 
End bp18003 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content50% 
IMG OID640467604 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001152293 
Protein GI145590291 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGTA CATCGGCCAT TCACTGCAAG CCGGAGACCA CTAGAGAGGA GGAGCTAGAG 
GTTGACGTCT TAGTAGTCGG AGGCGGCCTA GGGGGGCTTA TAGCCGCCTC TGAGCTTAAG
AAGTACGGCT ACAATCCCAA GGTAGTATAC ACGGGGAACT TGGGGGGGCA CCACATCCTT
GGAGACGCCC CTAGGTATTC CGATATAGAT ATTGACGGAG TAATAGCAAA AGCAAAAAAC
CTAGACGTAT CTCAGGGGTT CTTTGATGGA GTATACTTGT ATCAGGGAGG GGTGAGGTAT
CGTGCGCGTT ATAGACACCT TATCCTCGCC ACAGGCGGCA CCGACGTGCC GATTACATTT
CCCGGCGGAC TTAAAGCACC CCAAAAAACC GCAGAGGAGG TTCTCCCAGC TACCCCAACT
GGTTTAAAAA TTGTGGTCTG GGGCACTACT GAATGGGGGC TACGCACAGC CCTTGCGTTG
AGAAATCGAG GTAATGAAGT AGTTGTCTTG GACAACTCGG CATACTTAAG AGACGTAAAG
TATTACGAGA AAGTAAAGTC AAAGATTGAC TTTCCAATAA TACCCTCTGT AATTGTGAAG
AGATATGAAA AGGGCGTGTT GACATATGAC ATAATAACCG GCAAAAAAGA GCCAGAGAGT
AGAAAGGAGA GAGTTGACCT CATAGTTTCC GCCGTGAGGA TTGTGAATCC CTACGTACCG
CTCAAGCTTG GATATAAGAT ATACTACACC TTCGAGCTGG GCTCGCTCAT ACCGAGGCGT
AATAACTACG GCGAGTTGTT AATAGTAGAC GATGGGGGGA GAGCAGTGGG CGGGAGCAAT
GTGTACGCAA CCGGCCACCT CTACGGAGCG CTTAGGGAAA GCCATATAGC AGAACAAGCC
AAAGTACTGG CAACGTACAT AGCCGCGAAA GACGGTGTAG AGTCTATGGA CAAGGCAAAA
GACGCGCTTG ACAAGCTCTT GGTCACGTTC ACAGTAGAAG CAAACTGGCT TTACAACCTG
GGCAACAGGC TTGAACGCGG CACCGACGGC ACAGGGCGCT ATGTGGAGCC TAACGTCATC
GATGTCCCCC ACTGGGCATC ATTTTGGCCC CAAATAGAGG AAGCCGGCGA CATAGTGCTG
TGCCCCTGCG ACGGCACGCT GGCCGAGAGA GTTTTAAAGG AAATAGAGCA GATGAACAAA
CTTAAGAAGC TTAAGGTGAA GATCACGCAC GAGGAGACGG ACGTCCTCAG GCAATTAAGA
TTGCCCAAGC TCTCGTTCGG CGAAAGCGTA TGCGCAGAGA GCGTGTGTCT TACGTATGCA
TCTATAATAC TGGGGGCCTT GCTTGCGCAA AAACCCTCAT ACTTCCTTTA TGGCAAACCG
CAAATGCTCT ATGGCAGTAG CTGA
 
Protein sequence
MSCTSAIHCK PETTREEELE VDVLVVGGGL GGLIAASELK KYGYNPKVVY TGNLGGHHIL 
GDAPRYSDID IDGVIAKAKN LDVSQGFFDG VYLYQGGVRY RARYRHLILA TGGTDVPITF
PGGLKAPQKT AEEVLPATPT GLKIVVWGTT EWGLRTALAL RNRGNEVVVL DNSAYLRDVK
YYEKVKSKID FPIIPSVIVK RYEKGVLTYD IITGKKEPES RKERVDLIVS AVRIVNPYVP
LKLGYKIYYT FELGSLIPRR NNYGELLIVD DGGRAVGGSN VYATGHLYGA LRESHIAEQA
KVLATYIAAK DGVESMDKAK DALDKLLVTF TVEANWLYNL GNRLERGTDG TGRYVEPNVI
DVPHWASFWP QIEEAGDIVL CPCDGTLAER VLKEIEQMNK LKKLKVKITH EETDVLRQLR
LPKLSFGESV CAESVCLTYA SIILGALLAQ KPSYFLYGKP QMLYGSS