Gene Pars_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0017 
Symbol 
ID5055265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp12414 
End bp13442 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content44% 
IMG OID640467597 
ProductH+-transporting ATP synthase subunit C 
Protein accessionYP_001152286 
Protein GI145590284 
COG category[C] Energy production and conversion 
COG ID[COG1527] Archaeal/vacuolar-type H+-ATPase subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGA TACTCCGGAG ACCGTATCTA GGGCCTAGAG TAAGAGGACT ACGCATTAAA 
GAACTCCCCC GAGATAAGCT CATATCTCTA GCATATGCTA ATACTCTTGA CGAATTTTTA
AACATACTAA AAACTACCCA CTACAGTATC ACGCTTGACA GATTAACACG TGAAAATATT
TCAGAACTAC GTAGAAACCT TGTAAAAAAC TACCTAGATA CTGTCAGATC TATATTTTTA
AGTTCTGGAA GAGATGTAAA AAACGCCATA CTCCTTTCTC TTAAATACTT CGAGTATGAG
AACATCAGAA ACCTAGCCAT TGCAATAAAG GCTGGGAAAA ACCCAGAAGA TTACATCCTA
TGGGAGCCCT TGGAATTCAC GCGTAGGCGT CACATAATCG CAGGTCTACT AGGCGTAAAA
AACATCGAGG AAATTGAAGA AAGGCTTAGA AATCTAAAAC ACCCAGCATA CAAGGCGTTT
CAGCTGTCTA GCAAATATGG CGAGGAAAAA CTGAGCATAT TTCTAGACAG GCAGTGGCTA
GAAGACATCT CAACATCTCC TGTTGTTGAA AAGGACAAAT CGCTCCGTGC CTTAGTGGCT
GATCTAAGAG AGTACTTCAA CACGTTAATT GCTGTGAGGT CAAGAGTTTG GGGGCTGACC
GAGGAGTTAG AAGAGTTGAT TATTGGCAAG CCGTCGCCTG CTGTGCTGTC TGCCGTGAGG
GATCCGCCCG CACGATTTCT AGAGGTTACA CAATCTTCTG CATGGGGGAA GATTTTGGTA
GAAGAAGTCG CCGAGGCGCC CACACTGGAG AACATAGCCA CGGCAATGGA CAACATATAT
CCGGCTTATG TAAGGCGGCT TGCCGATATT TATATGTCGA GGTTTTCCGA GTTCTCTCTA
GGGGCGTTGG TGGCGCATCT CGAATACCTT AAAGCAGAGA TCACAACTTT GATAAGAGCG
GCATCGTTGC TGGCTGAGGG GGTACCTATG GAAAAAAGGA AAAAAATATT CGAGGCTTTG
GCTAGGTAG
 
Protein sequence
MSSILRRPYL GPRVRGLRIK ELPRDKLISL AYANTLDEFL NILKTTHYSI TLDRLTRENI 
SELRRNLVKN YLDTVRSIFL SSGRDVKNAI LLSLKYFEYE NIRNLAIAIK AGKNPEDYIL
WEPLEFTRRR HIIAGLLGVK NIEEIEERLR NLKHPAYKAF QLSSKYGEEK LSIFLDRQWL
EDISTSPVVE KDKSLRALVA DLREYFNTLI AVRSRVWGLT EELEELIIGK PSPAVLSAVR
DPPARFLEVT QSSAWGKILV EEVAEAPTLE NIATAMDNIY PAYVRRLADI YMSRFSEFSL
GALVAHLEYL KAEITTLIRA ASLLAEGVPM EKRKKIFEAL AR