Gene Pars_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0011 
Symbol 
ID5055590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp8407 
End bp9048 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID640467591 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001152280 
Protein GI145590278 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCAGC CATACACCCT AGAAGAAGGC AGATATCTAG TCAAGCTAGC TAGGTCTGTT 
GTAGAGGCTT ATCTAACACA CGGCAAAATC GTGATTCCAG AAAACCCCCC GCCGAGACTT
ATAAACGACA ACTACGGCGT ATTTACCACA ATAGAGACAG TCCAGGGAGA GAAATTTGAA
CTAAGAGGAT GCATAGGCTA TCCCGAGGGG TATAAAAACA CGCTATATGC CACAATTTAC
AGCGCCATAG GTGCATGCTG CCAAGATCCC CGCTTCCCCG CTATGCGCAG AGAAGAGCTT
AATTCTGTTG TCTTCGAAGT GAGTATTCTA AGCCCATTGA CGCTACTAGA CGACGACCCT
AGGAAATACC TTGAGTTGGT GCAGGTCGGC CGCCATGGCC TTGTAGTGAA GAGGGGGCCT
TACTCTGGCT TACTTCTGCC ACAAGTGGCA GTCGAAGAGT GCTGGTCTAC AGAAGAGTTC
CTAATACATA CGTGTGTGAA GGCGTGGCTT CCGGGCGATT GTTGGCTAGA TCGTAGGACA
AAACTCTACA TATACGAGGC ACAGATATTC CGGGAGAGAG AACCCAACGA GGAGGTATAC
CAAAGAGATC TATTAGGCGA GCTAGCCAAG TGCCGAAAAT AG
 
Protein sequence
MFQPYTLEEG RYLVKLARSV VEAYLTHGKI VIPENPPPRL INDNYGVFTT IETVQGEKFE 
LRGCIGYPEG YKNTLYATIY SAIGACCQDP RFPAMRREEL NSVVFEVSIL SPLTLLDDDP
RKYLELVQVG RHGLVVKRGP YSGLLLPQVA VEECWSTEEF LIHTCVKAWL PGDCWLDRRT
KLYIYEAQIF REREPNEEVY QRDLLGELAK CRK