| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0005 |
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| Symbol | cdc6 |
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| ID | 5055248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 3361 |
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| End bp | 4530 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640467585 |
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| Product | cell division control protein 6 |
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| Protein accession | YP_001152274 |
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| Protein GI | 145590272 |
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| COG category | [L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
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| TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATTG TAGTTGATGA AGCCGTGTTT TCACCCAGCT ACGTCCCTGA TAAGTTACCG
CATAGAGATG AACAACTGCG GCAGTTGCAC CTTCTGCTGT CTGGATGGCT TCAGAGCCCT
GGCCAACACT ATCCCAGAGT AACCCTAGTA GGGAGGCCAG GCACTGGTAA AACTGTCACA
ATACGTAAAT TATGGGAAAT GTATAAAGAG CGATCAAAGG CTAAGTTTAT TTATATTAAT
GGATTTATAT TTAGAAATTT TACTGCAATT ATAAATGAAA TTGCCAGATC TTTAAGTATC
CCGTTCCCGC GTCGAGGTTT AAGCAGAGAC GAGTTTTTGG CGCTTCTTAT AGAACACCTA
CGTGAGCGCG ATCTCTACGC CTTTATGGTT TTTGACGACG CCTTTAACGT ATCGCCAGAT
ATCCTCTCAA CTTTTATTAG ACTGGGGCAA GAGGTTGACA AACTAGGCGC ATTTAGGGTA
GCCCTGGCTG TTGTGGGTCA CAGCGACACG TTGTTAAACA ACCTTGACCC CTCCACACGT
GGAATAATGG GCAAGTATGT GATACGATTT AACCCTTACA CCAAGGACCA GATTTTCGAC
ATATTACTAG ACAGGGCGAG AATGGGGCTT GCAGAGGGTT CCTACAGCGA AGAAATACTG
CAGATGATAT CGGACATAAC TGGGGCCCAG AGCCCCCTTG ATGCCCACAA AGGCGATGCT
AGACTGGCAA TAGATATCCT CTACAGATCA GCCTATATCG CCCAACAAAG CGGGCGGAGA
CAGATAATGC CTGAAGATGT GAGAAAAGCT TCTAAAGAGG TCTTGTTCGG AGTGTCGGAA
GAAGTGCTGA TAGGCCTCCC GCTCCACGAG AAGTTGCTCC TACTTGCCAT TGTCAGGACA
CTTAAAACGT TGCACACCCC TTATGTCACA TTTGGAGAGG CAGAAGAGAC CTATAAAATG
ATCTGTGAAG AGCATGGCGA AAAGCCAAGG GTGCACAGCC AGTTGTGGAC TTATCTTAAC
GATCTCAAAG AAAAGGGCAT AATCGAGACT CGTCAAAATA GAAAGGGTGA GGGGGTACGT
GGGCGGACTA CACTCATCTC AATAGGAACC GAGCCCCTTG ACACACTGGA ATCTGTGCTG
ATAAAGATAA TAAGGGAGGA GTTAAAATGA
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| Protein sequence | MAIVVDEAVF SPSYVPDKLP HRDEQLRQLH LLLSGWLQSP GQHYPRVTLV GRPGTGKTVT
IRKLWEMYKE RSKAKFIYIN GFIFRNFTAI INEIARSLSI PFPRRGLSRD EFLALLIEHL
RERDLYAFMV FDDAFNVSPD ILSTFIRLGQ EVDKLGAFRV ALAVVGHSDT LLNNLDPSTR
GIMGKYVIRF NPYTKDQIFD ILLDRARMGL AEGSYSEEIL QMISDITGAQ SPLDAHKGDA
RLAIDILYRS AYIAQQSGRR QIMPEDVRKA SKEVLFGVSE EVLIGLPLHE KLLLLAIVRT
LKTLHTPYVT FGEAEETYKM ICEEHGEKPR VHSQLWTYLN DLKEKGIIET RQNRKGEGVR
GRTTLISIGT EPLDTLESVL IKIIREELK
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