Gene OSTLU_7913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_7913 
Symbol 
ID5006877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009375 
Strand
Start bp140788 
End bp141336 
Gene Length549 bp 
Protein Length183 aa 
Translation table 
GC content57% 
IMG OID640422298 
Productpredicted protein 
Protein accessionXP_001422906 
Protein GI145357398 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.189253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00110765 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GAAAAGGCGG TGCCGTACAC CGTCTTCGTC AAGGATGTGC CGGCGAGCGT GAGCGAACGC 
GAATTAGCGG ATGTTTTCGC CTCGTGCGGC CGCATCATAG ACTGTCGCAT GTGCGGTGAT
GCGAACACAC ACAAGTTTAG CTACGCCTTT GTGGCGTTTG AGTGCGCCGA GGCGGTGGAT
CGGGCGTTAT TGTTGGACAA GACGCCGCTC CACGGGAAAA ACATCATGGT GAAGAAGAGC
GACACCGCGG TGATCCCAGT GAACCCGTTA CTGCTACCGC AGAATGAACG AGAGGTTGAA
TCGTGCGCGA GGACAATTTA CGTCGCAAAC GTCGACAAGA CCGTGGACTC GCACGCGTTG
AAGTTACTTT TCGAGGACCG CGCCGGCCCC GTCAACCGCT TGCATTTGCA AGTGAAGAAC
AACGCCGTGG CGAATGTAGC CTTCGTAGAG TTCGTCGACC TCGAAAGCGT GGGAACCGCG
CTGCATTTGA CGGGTGAACA GCTTGGAAAC CGCATGATTC GCGTGAGTGC GTCAAAGACG
CCGCTCCGT
 
Protein sequence
EKAVPYTVFV KDVPASVSER ELADVFASCG RIIDCRMCGD ANTHKFSYAF VAFECAEAVD 
RALLLDKTPL HGKNIMVKKS DTAVIPVNPL LLPQNEREVE SCARTIYVAN VDKTVDSHAL
KLLFEDRAGP VNRLHLQVKN NAVANVAFVE FVDLESVGTA LHLTGEQLGN RMIRVSASKT
PLR