Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_36723 |
Symbol | |
ID | 5006862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009375 |
Strand | + |
Start bp | 90314 |
End bp | 91444 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | |
GC content | 56% |
IMG OID | 640422283 |
Product | predicted protein |
Protein accession | XP_001422804 |
Protein GI | 145357190 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00193554 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCGCCG TTGGTTACGC CACGATTCGC GTAAGACGCG GGCACTTGCT CGAAGACGGC ATCGCCGGTC TTTCGGATAA GCTCACAGAG ACGCTCGGCG GAATCATTCG CGTGCAGTTC ATCAATCAGC AAGGGCTCGA AGAGGCTGGC GTCGACGGCG GCGGTTTATT CAAAGATTTC TTGAACGATT TAATTGCGGA AGCGTTCGAT CCGAAATTCG GCTTGTTCGT CGAGACGCCC GAGCGCACGC TCTACCCGAA TCCAGCGTCT GAGTTGCACG CGGGCGAGCG ACACTTGCAG TACTTTTACT TTCTCGGCGC CATCCTCGGC AAAGCGTGCT ACGATGGGAT TCTTCTCGAC GTTCCACTCG CTGATTTCTT CCTCGCCTCG CTGAAAGGTC GACACGTCGA GTTTAACGAC CTGACGACGC TCGATCCCGA GCTTTATCGC AACTTGGTTT CGCTCAAACG CTACCAAGGC GACGTCGAGG ATTTATGTCT GTACTTTACC GCCATCGATC GAAGTGGCAT GGAAGAAACT GTGATCGAGC TCATCCCGAA TGGCTCGAGC GTACCGGTGA CGAGGGCTAA CGTCCCGCGG TACCTTCATT GCATGTCGAT TTATTTGCTT CGAGCGCAAA TCTACCGCCA ACTTTCGAGC ATGAAGGCGG GCTTTAGCAT CGCCGTTCGC AAGCGTTGGC TCGACATGTT CACCCCCGCC GAACTGCGAT TACTCATATC AGGTAATCGC ACGGGAAGCA TGGACATCGA TGACATGGCG GCAAACTGCG AATACTCTGG CGGCTACGAG GCGTCGCATC CGACGATTCG CGCGTTGTGG CGCGTCATGC GTACGATTTC CCCAGACGAC CAACGTTTGG TGCTCAAATT CATCACCTCG TGCAGCAACA CACCACTGCT CGGGTTTTCG CATCTCGAAC CCAAACTGTG CGTGCATCGA AGCGGTACCG CGGGCACGGA CGCCCCCGAC GCGACCGCGG ACTTGACCAG GCTTCCCACC GCCGCGACGT GCATGAACCT TCTGAAACTA CCGCCGTATT CTTCCGACGA CGCGTTGCGC GAAAAATTAA TGTACGCCGT CAAGTCCGGC AGCGGCTTCG ATTTATCCTG A
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Protein sequence | MGAVGYATIR VRRGHLLEDG IAGLSDKLTE TLGGIIRVQF INQQGLEEAG VDGGGLFKDF LNDLIAEAFD PKFGLFVETP ERTLYPNPAS ELHAGERHLQ YFYFLGAILG KACYDGILLD VPLADFFLAS LKGRHVEFND LTTLDPELYR NLVSLKRYQG DVEDLCLYFT AIDRSGMEET VIELIPNGSS VPVTRANVPR YLHCMSIYLL RAQIYRQLSS MKAGFSIAVR KRWLDMFTPA ELRLLISGNR TGSMDIDDMA ANCEYSGGYE ASHPTIRALW RVMRTISPDD QRLVLKFITS CSNTPLLGFS HLEPKLCVHR SGTAGTDAPD ATADLTRLPT AATCMNLLKL PPYSSDDALR EKLMYAVKSG SGFDLS
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