Gene OSTLU_29798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29798 
Symbol 
ID5006924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009375 
Strand
Start bp301238 
End bp301681 
Gene Length444 bp 
Protein Length147 aa 
Translation table 
GC content59% 
IMG OID640422345 
Productpredicted protein 
Protein accessionXP_001422955 
Protein GI145357498 
COG category[K] Transcription 
COG ID[COG5250] RNA polymerase II, fourth largest subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value0.807324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG CGCTGTGCAT AGGAAGAAAG TCCGCGGAAG ACGTCGAGGA CGCCGGGGAA 
CTGCGACTCG GTCCCGATTT CGACGACGCC AACTGCTTGT CGCTCGCCGA GGTGAAGATC
GTGTGCGAGT CGAAAGTCGC CGACGACGCC GAACAAGCGG AGGAGACGTC GACGACGCGC
ACGCGGGTGT TCGAGAAGAC GTTAGCGTAC GCGAAGCGGT TCAGCGGGAA CACGAGCAGC
ACGGCGGCGG CGGCTATTCG GGAATTACAC AACAATTCAG GGTTGCACGA CTTTGAAGGC
GCGGCGATCT CAAACTTGAA GCCGCAGGAT TGGGACGAGG CGAAGACTTT AGTGCCGAGC
TTGGAGCAGG AAGATCGCGG GTTGACCGAG GAAGGGATTC AAGCGATGTT AGACGAGATG
TCGAACGTGC GGAAGTTCGA ATGA
 
Protein sequence
MSAALCIGRK SAEDVEDAGE LRLGPDFDDA NCLSLAEVKI VCESKVADDA EQAEETSTTR 
TRVFEKTLAY AKRFSGNTSS TAAAAIRELH NNSGLHDFEG AAISNLKPQD WDEAKTLVPS
LEQEDRGLTE EGIQAMLDEM SNVRKFE