Gene OSTLU_29678 details

Gene Information

• Locus tag: OSTLU_29678
• ID: 5006866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ostreococcus lucimarinus CCE9901
• Kingdom: Eukaryota
• Replicon accession: NC_009375
• Strand: +
• Start bp: 104439
• End bp: 107904
• Gene Length: 3466 bp
• Protein Length: 1150 aa
• GC content: 56%
• IMG OID: 640422287
• Product: predicted protein
• Protein accession: XP_001422808
• Protein GI: 145357198

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.00854714
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.00187759
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGACACGA ATTGGACGCC AGCGACGCCC GCGCGCGCGC GTGCGGACGC ACGAATCGCG 
TCGGATAAGG TGCTGTCGAC AAAGGCGTTC GAGGACGCGC GGGTGAAGGA TCACCGCGAC 
GTGGAGCGGG AACGCGGGGT GTACCTGCCG CCGAGCGCGG AAGAGGCGGC GACGCACGCG 
GACAGCGCGC AGCCGAGACT GCTGAGCGAG GATGGGAAAT TGGAAAAACT TAAATATTTT 
GACTCCGAAG TAGACTTGGG ATTGGAGTTC GGGGCGGGGG TATCGGGATA CTTTTTCGTG 
CTGCGGGCGT TCGCGTGCTT GTTCTTCGCG GCGTTCGCGT TGAATTTGCC CGCGATGTTC 
ATTAATTACA CGAGCACGTA TTACGCGTCG CATTACGAAG CGGAGCCTGA AACCGCGACA 
GCGCCGACGG CGGACGCGCT CAGTGGACGC CCGACGACGT CGTTTCACTC GTGGTTCGTC 
GATTGGCACT GGGCGAATCC GATGAGCGCG AGCTTGGGGA CCGTGGCGCC TGACGATGTG 
CCGCAACGAG CGTGGGTGCT CGCGGGGACA ACGAGTGGGG TGCTGCGGTG GAGCTCCAGT 
AAGATAGATT TCATTCGATT TTCGGTGGTG ATGGATGTCG TGGTGTCCTT GATAATTATA 
TTGAGCGTTC CAGTGATTAT GCTTGTGTTG ATGCGTACGG AGCGACGGGT CGAGAGAGGG 
ACGGCGACGT TGAAGGATTA CACGGTATTA GTTACAGGAT TACCAAGCGA TGCGACCGAT 
GAAGAAGTGC GATGCTTTTT CGCGCTCAGG TTTGGGACGG TAGCCGACGT CGTGCTCGTA 
AAGACGGAGT GTATGCAAAT CAACGCGCAG CGACGGCGTC GGCGCTTGTT GGAGGATTAC 
GACGAAGCCG AAGCTGCGCT CATCGCCGCA GGTAATCGCG GAGGTGACGG CACGAAGACG 
GCTATAGAAA ACGAGATATT GGCTGTGGAT AGGAAATTGA AGCGCAGAAG AGCGCGAACG 
CGGGCGAAAC AGTGTAGTGC TTTCATCACG TTTGAAACCG AAGGCTCAAA GATTGATTGT 
ATATTGCGCA ACACGCGCAG TATAATGTCG TACATCTTTG CGTTTCCTAG GAAAGAGCGT 
TTCCGAGGAA AGCGGAAGTA CAGAGTGCGA GATGCTCCCG AACCTGAGGA CGTACGATTC 
GAGAATCTGA ATCTCTCGAA TCGCTCATGG CGTCGACTCG TCGTGCTATT CTCGTGCTCG 
GCCGTCGTGC TCTTGTGTTA CGGCTTTTTG AAGATGCTCG TGGATGACAA GGAGAAGCTG 
TGGGAGAACG CAGACATGAT GGTCACTACG CTTGCGGACG ATGTTGGCAT TGTCGTCGCC 
CACGGTAATC CGGTTGAGCA ATTCGAGACG CATAAGAATC AGTTCAGGAC AGCATGCAGA 
GCTCGCTTGG ACCAATGCGG CGTGGCTTTT TCCAAGGACA AAACGTACGT TGGCATGCCT 
TGGGGGGCGC CAATTTACGC TTTCTACGAC TACCCCAACG CCACACTCTT AGATCGTCGT 
TACGCTCAGC AGGATGCGGT TCGTGATTTG ACGAATTGCG CCCAAGACAC CAACCGTTGT 
CCGGGAGGTC CGACGATGCA AAACTGTCAC GCGTGCTACT GCGCCAGTCT GAAGTACGGC 
TTAACTTCGG AGGTTGTTCG GGCATACAAC AAAGCCATTC GCCACTCGTG CGCGAAATAC 
GTGAACCTCG GTCCAGGAGA GTATTACAAC TGGTTGTGGG TGTCGTTTTG CATTACGCTC 
ATGAACGTCC TCCTCGAATG GATTGTGCCC CTCCTCGTCG CCGCAGAACG TTTGCGCACG 
CGCAGTGCCA CGAAGGTGCT CAAGACGAAA ATAATCTTCT GGGTGCGATA TTTGAACGTC 
GCGGTTATTT ATGGCTTGCT CAACGCCAAT TTCTATCACA TTGGCAGGTA TTTCCCGCTC 
ATCAAGCAAA TGTTTGGGCT CAAAGGCGAG TACGCAGATT TCACGAGCGA ATGGTTCAAC 
GACGTCGGCT TGGTGTTGTT TTTCGCAATC ATGATGAGCG TGACGATACG TATTTTGGCT 
CGAGTACTTG TAGACATCAT CACGCATGTC GGTCGAAAAT TCTCCGTGGC GTACTGTCAC 
ACGCAAGCAA AGCTGAACAA GGCGTTTGAA GGGCCATCGT TTGACACCGG CGCCAAGTGC 
GGCGACGTTT GCTTTACGAT TATGGCGGCG ATGACCTTTT CGAGCGGTAT GCCGCTGATA 
TACTTGGTTT TGTCGATGTA CTTCGTGTTG GTGTACCTGT ACGATTACCG CCTCCTGTTG 
AAAGTGTGCA AGTTGCCCGA AAGATCGAAG AGCACGCTTC CCATGACGGC GGCGAAGGTG 
CTTTTCATCT CAGTCTCGAT TCACGCTCTC ATCGGTCTTT GGATGTTCTC GTACCACTGG 
ACACCTGATT TGGCGAAACC GACGAAAGAC TTTGAACATT CGAGTAAGAA CAATGCTCCT 
CCGCTTGCGT ATGAGATTGG GGGTGAAATA TTAAACCCGC CGCACGACAA CGGCGCGCTC 
ACGGCCATCG TGCAAAGCAC CGGCGTCGCG ACGACGTACT TTCATCAGTA TCGCGACGCG 
ACAGTCGGGG CGTTGTCGGC GGGAGATTTC GTCGCTCCAC CGCCACGCGT ACAGCTGCGT 
TTCGCAGAAC GACCGTTCAG CGAAGCGGGG ATGCCGTTCA TGGGTATGTT CTTCGCCCTT 
TTGGGCGTCA TGGGTTTGTG GCAAATCGCA GTCGCGTGGC ATAACTGGGG CAAGTCGCGT 
CGAGACATCG CGCGCTCGTG GAAAAACTTA CCTCAGTATC ACGAAGCCAT CATGACCGGG 
TTAATCGTCG GTTCGGAGAC GTACCGTCCC GAATATCAGC CCGATTACGC GTTCTTGTTC 
GACAAGAGCA CTGTCGCGGC GGCCAAAATG AAACTAGGCT CGTACGCGGG AGGCCCCGTG 
CGCGGCGACT CGGTGAACTC GCGAGACGCG TGGTCGCTCG GACAAGGCGA CGACGATGAT 
ATCGCGGAGC TGATTCATCA TCGTTATGAT AACGAACGCG AGTACGACGG TGGCGCGCCT 
TGGGTGCGTA AGACCGGTTC AAAGATATAC GGCGGCGACG CCGCGACCGC GAAGCGAGGC 
TCTCGCGGCA CGCGCCAGCG CGACGGCGGA CATTACGGCG TACCAGTGGT CGATGTTCGC 
GCTTTGGGGG TTGGAAGCGA CTACAATCAC GTCGAAAACA ACGCGTTCGG GCACTCCGAC 
GCGTTCGTCG CGGATGATCA TGAGTGGGAC TCCGCCTCCG ACGCCGACAC GCTCGACGAC 
GACGCGTCGA CGCAGCGAAG TCAATCCTTT AGCGATTACG AGAACGATGA TCAACGATTC 
GACGGCGCCA GGCGACCGGC ATGGCTCGAC TAGGACGAAA CGTACA 

 

Protein sequence

MDTNWTPATP ARARADARIA SDKVLSTKAF EDARVKDHRD VERERGVYLP PSAEEAATHA 
DSAQPRLLSE DGKLEKLKYF DSEVDLGLEF GAGVSGYFFV LRAFACLFFA AFALNLPAMF 
INYTSTYYAS HYEAEPETAT APTADALSGR PTTSFHSWFV DWHWANPMSA SLGTVAPDDV 
PQRAWVLAGT TSGVLRWSSS KIDFIRFSVV MDVVVSLIII LSVPVIMLVL MRTERRVERG 
TATLKDYTVL VTGLPSDATD EEVRCFFALR FGTVADVVLV KTECMQINAQ RRRRRLLEDY 
DEAEAALIAA GNRGGDGTKT AIENEILAVD RKLKRRRART RAKQCSAFIT FETEGSKIDC 
ILRNTRSIMS YIFAFPRKER FRGKRKYRVR DAPEPEDVRF ENLNLSNRSW RRLVVLFSCS 
AVVLLCYGFL KMLVDDKEKL WENADMMVTT LADDVGIVVA HGNPVEQFET HKNQFRTACR 
ARLDQCGVAF SKDKTYVGMP WGAPIYAFYD YPNATLLDRR YAQQDAVRDL TNCAQDTNRC 
PGGPTMQNCH ACYCASLKYG LTSEVVRAYN KAIRHSCAKY VNLGPGEYYN WLWVSFCITL 
MNVLLEWIVP LLVAAERLRT RSATKVLKTK IIFWVRYLNV AVIYGLLNAN FYHIGRYFPL 
IKQMFGLKGE YADFTSEWFN DVGLVLFFAI MMSVTIRILA RVLVDIITHV GRKFSVAYCH 
TQAKLNKAFE GPSFDTGAKC GDVCFTIMAA MTFSSGMPLI YLVLSMYFVL VYLYDYRLLL 
KVCKLPERSK STLPMTAAKV LFISVSIHAL IGLWMFSYHW TPDLAKPTKD FEHSSKNNAP 
PLAYEIGGEI LNPPHDNGAL TAIVQSTGVA TTYFHQYRDA TVGALSAGDF VAPPPRVQLR 
FAERPFSEAG MPFMGMFFAL LGVMGLWQIA VAWHNWGKSR RDIARSWKNL PQYHEAIMTG 
LIVGSETYRP EYQPDYAFLF DKSTVAAAKM KLGSYAGGPV RGDSVNSRDA WSLGQGDDDD 
IAELIHHRYD NEREYDGGAP WVRKTGSKIY GGDAATAKRG SRGTRQRDGG HYGVPVVDVR 
ALGVGSDYNH VENNAFGHSD AFVADDHEWD SASDADTLDD DASTQRSQSF SDYENDDQRF 
DGARRPAWLD