| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29655 |
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| Symbol | |
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| ID | 5006944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009375 |
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| Strand | - |
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| Start bp | 53460 |
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| End bp | 55343 |
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| Gene Length | 1884 bp |
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| Protein Length | 622 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 640422365 |
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| Product | predicted protein |
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| Protein accession | XP_001422886 |
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| Protein GI | 145357357 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.233661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.159292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAGG CGATGGAGGC GCTGTCGAGC GAACGCGAGC GGTTGGCGAA TTTCACGAGA
AACGCGCTGG CGAGCGAAAA CGTGCGAAGA GCGACGGAAA AGGACGTCGG GGAGCTGCGC
GAACGTCGTA AAGCGGTGGA TGCGGCGAAG AAGGAGTACG ATGGGGTGCG ACAGCGATAT
ATGAAGACGA CGGGAGGGGA GGAAGAGTTG CGCGCGGCGA AACTGTCGTT TGAGCGCGCG
CGACGGGATT TGCTCGTAGC GCTGCAACGA GTGAATGTGG CGAAGCACAC GCGCACGAAA
CGGTGCGCCG TAGACTTAAT CGACGCGCAG TTGGATTACT TTCGTCGGGG GGTGGAAATA
TTGACTCGCC TCTCGCCCAC GCTGGATATT TTGAGAAAGG ACGTCGCGGC GGCGGAGGCC
GAGGGCGCGG ACTTAGAGGC GGCGTTGAAC GAGGAAATGG AAAAGCTGAT GGCGCGGTGC
GATGACGAAG CGCAATCGAC ATCGGACGCA CTGTCGATGG TAAGTGACCG CGCGAGAGAG
ATGAGCGCGC AGATGGCGTC GTCCGCCGCG GGATACGGGT CCTCTCAAAA CGAAGCGTTG
ATGCAAGGAT ATTTATTGAA GCGATCGAGC GGGAAAATTC AAGATTGGAA GCGGCGATTC
TTCGTTTTGG ATGCGCGCGG ATCGCTGACG TACACGAAAT CGCTTTCGTC CAATCCGAGG
AAAGCGCTCG GCGGGAAGTT GTTATCGCTC GGGTCGATGC GAAATAAGTC GTCAAACGCG
CCTTCGACGC AGACGACTGG CGGAGGAGAG GTACGCGAGA CGGTATCTTT GCTCACGGCG
ACGATTAAAC CCGACTTGGA CGACGACTCG AACGCGCGTT TCGCGTTTCG CATCGTTTCT
CCCGAAAAGA CGTATTATTT ACGCTGCGAA AGCAACGCGG AGCGAAGCAA ATGGATGGAA
GCTATCACGA CCGCGATCGC GAGTTTATTA AATTCGAGCG TGAACGAAAC AATCCTGGCA
GAGCACGAAG CGAGCGTGAA CAAATACGGG AGCAAGCATT CGCGGACGAT GTCGTCGATC
TCGAGCGTCT CCGCGTACGA CGGTCCGCCA CCCTTGACGG TGCTCGGCGC CGTGCCCGGC
AACGGATTCT GCGCCGATTG CGACATGCCA GAGCCGGATT GGGCGAGTCT TAACCTCGGT
ATCATGCTTT GCTTGCAATG CAGCGGCGTT CATAGGCAGT TGGGCGTGCA GGTGAGCAAA
GTTCGGAGCG CAACGCTCGA CGTGCGCGCG TGGGAGCCAA GCGTGTTGGA ATTTTTCTCG
CGCTGGGGCA ACGCCCAATC GAACGCGCGT TGGGAGTACG AAAAAGCCGA AGTCGAGGCG
AAAAAACCCA ACAAGAATTC GTCGCTCGAA TCTCGAAAGG CTTTCATACT CTCAAAGTAC
GTCGCCAAGG CGTTTTGCCG TCGCGAGGCG CAACCGACCG AGTCGCAGCT CTTGACGGCG
ATCAACTCCA ACTCGCTACC AGCCGTCATG GATTTACTCC TCAAAGGCCC GCACATCAAG
ATGCACTGGG TCATGCTCAC CGCCGCTTGC GACTGCGGTG ATGCTTCCAT CGCCATCCTC
GAAGCTCTGC TGCACCACAA CGTCGACGTG AACGCTCGAG AGAATCCGTA CACCGAGGAC
ACCGCGCTCC ACTACGCCGC ACGAAGAGGC CGAGACGCCT TCGCCAAGGT TCTACTCCGT
CGCGGTGCCG ACCCGCGCGT CCTCAACGGG CGCGGTCAGA CCGCTTTCGA CGTCGCCGTG
GACGTTCACG GCGCGATTCG CGACGAGGAT TTACTCATCA TGCTCAGCGC CGCGCAAGAC
GACGACTAGC CCTTGTAACG CTCG
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| Protein sequence | MREAMEALSS ERERLANFTR NALASENVRR ATEKDVGELR ERRKAVDAAK KEYDGVRQRY
MKTTGGEEEL RAAKLSFERA RRDLLVALQR VNVAKHTRTK RCAVDLIDAQ LDYFRRGVEI
LTRLSPTLDI LRKDVAAAEA EGADLEAALN EEMEKLMARC DDEAQSTSDA LSMVSDRARE
MSAQMASSAA GYGSSQNEAL MQGYLLKRSS GKIQDWKRRF FVLDARGSLT YTKSLSSNPR
KALGGKLLSL GSMRNKSSNA PSTQTTGGGE VRETVSLLTA TIKPDLDDDS NARFAFRIVS
PEKTYYLRCE SNAERSKWME AITTAIASLL NSSVNETILA EHEASVNKYG SKHSRTMSSI
SSVSAYDGPP PLTVLGAVPG NGFCADCDMP EPDWASLNLG IMLCLQCSGV HRQLGVQVSK
VRSATLDVRA WEPSVLEFFS RWGNAQSNAR WEYEKAEVEA KKPNKNSSLE SRKAFILSKY
VAKAFCRREA QPTESQLLTA INSNSLPAVM DLLLKGPHIK MHWVMLTAAC DCGDASIAIL
EALLHHNVDV NARENPYTED TALHYAARRG RDAFAKVLLR RGADPRVLNG RGQTAFDVAV
DVHGAIRDED LLIMLSAAQD DD
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