| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_19230 |
|---|
| Symbol | |
|---|
| ID | 5006973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009375 |
|---|
| Strand | + |
|---|
| Start bp | 177382 |
|---|
| End bp | 182224 |
|---|
| Gene Length | 4843 bp |
|---|
| Protein Length | 1544 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640422394 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422832 |
|---|
| Protein GI | 145357248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00281974 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCCC CGTCGCGCGC GCCGTGCGCG TCCGCGCGCC CGGAGGCCGG CGTCGTCGAC
GCCCTCGATG ATCTCGCCGC CGTCGACGCC CGCGCGTGCG GCATCGGCAA GCTCACGATC
GCGCACGACG ACGACGACGA CGACGCGCGA GGTCTCCGCC ATCGCGACCG CGGCGCGTTC
GCCCTCGATT TGCGCGCGTG GTCGTTCACC GCGCGCACGC AGCCGGTCCG CGCGCTCGGG
GCGTGCGCGC GAGACGCGTC CGTCGACATG CGCGTGCCGT TCAGGGACGA ATACGAGCGA
CACAGGGCGT CGCGACCGGA CGAACGCGCG CCGCGAGGGG CGAGTTGGCG CATCCATCGA
GTGCGAGGAT GGCGCTTCGA CCTGCGCGCG CTGTACGAGG AGGTGAAAAG ACGCGGTGGC
GCGGACGCGA TCGATGGAAA TCAAGGCTGG CGCGAGGTCG CGGAGGCGAT CGGGGCGCAC
GGACGCGGAT GCGCGGCGGG ACACGCGGCG AGAGCGCTGC ACGGGGCGTG GCTGGAGGCG
TTCGCGCGCG ACGCCAAGCG AAGAGAAGAC GCGGTGAAGA GCGCGCAGTT CGACGCGGTG
AAGGGAGAGA TCGAACAAGA TGACGCGCTG GCGATCGATG CGCTGTGTGG GCTCGAATTT
GGGGCGTCGG GCGCGCCCGA ACGGCGAGTC AAGGTGGAAA ATGTGCGTAA TTCGTGCCAT
ATCTTCTTCG CGCGGGACCG GGATGACGGC GAATCGCACG CGTTCGCGGC GCGTGCGACG
CGCGCGCGCG ATGATGGGCG TCGCGATGAC GTGCGACTGA CTTTTACGGC GCGTGTTTTC
GCGACGCAGG GCCTCGATCT CGTCGCCTCG CAGCTCGCGG ACGCGCCCGA GGGCGACGCC
GACTGCGACG TGTGCGGCGC GAGCGGGAAC GAAGACGCGA TGATCCTGTG CGATGGGTGC
GATCGAGGGT GCGTATACGA CAATGCCACG CGAGAACGCG CGCGTGAAAA TTATCTCGAT
CGTTCGGACG CGCGTTCGGG GAGAGAGAGC GCTCGCGCGG CGCGCGAGGG CGCGGCGAAC
GCGCGCGTGG GCGACGGTTA GACGTGGGGT TTAGAGGCGC GCGGGGGAGA AGGAGCCGCG
AAGGAGCGAC GAGACTGACG AATGATGCGC GCGTAGGTCA CATATGTACT GCTTAACGCC
GAAGATGACT GAAGTGCCGA GTGGAGAGTG GTTTTGTGGA CGATGCGAAG AGATTGACGC
GGAGGTGGAG CGATTGAGCG CGGATGAAGG GACGCAGTTT ACGCTCGGCG ATTTCAACGA
GGCGTGCATA GAATTTGATA CGGCGTTCTT TGGCGAGGAC GCCAAGCGAA CTGGGATCGA
TATGCAGGTG ATTGAGGAGT GTTTCTGGCG AATGGTTGAA GATGCGAGCT CGGTGGATGA
TGTTTGCGAG GTCAAATGCG GCACGGCGAT TGACACGACA AAGTACGGAA GCGGGTTCCC
GAGACACGGC GAAGCGCTTC AGGTAAAGAT TGACGGCGTG AGCCCGGAAT CTATCAAGCG
CTGGTCAGAG TCGAAATGGA ATCTCAACAA CGTCGCGCGC GCGAGTGGGG AAAAGTCGTC
GCTACTGGGC GCGTTGAAGG ATGACGTGGC GGGCGTGACG ACGCCATTCT TAGAAGTCGG
AAGCACGTTT AGTTCCACGA CTTGGCGTCG AGAAGAGCAT AACATGTACA GTATCACTTA
CAATCACTGG GGTGCCGCGA AACTGTGGTA CTGCGTGCCG GCGAGTGCAG CGGACAAGTT
GGAAGAATGC TTCCAGAAGG TGATGCCCGA CGTCTACGAG GCGCACGTCA ACGATTTGGG
AAGCGTCTTT ACGATGCTCT CGCCGAGCTT CTTGATGAGC GCGGGAGTGC CCGTGCACAC
GTTGGAGCAA TTCCCAGGAG AATACGTGGT GACGTATCCC GGGGCGTACT ACGCGTCGTT
CAACTGTGGA TTGAACTGCA CGGAGAGCGT CAACTTTGTG CCCGCTGACT GGCTCCCAGA
GGGCTCGGCG AGCGTGGAGA GAAACCGATC GTACGCCAAG CGTTCATTGT TTAGTCACGA
CGAGTTGGTT TGCAGAGTAG CAAACAATCC TAGTTCGAGC ATAGCGCCGC ACTTGTGGCC
CGAGATTGCG CGCTTGTACG CTGAAGAGGC AAACGGTCGC GCCGAGCTTT TCGCGTCTGG
CGTGACGCGC AGCGCGCAAA TGACGTCAGC AGACGACGAC GACGACGACG ATGGCTGCGA
AAAGCCTCGT AAAGTACGAT CTAGGTTTGA CGATGCATCG AACTCTGGAT CCGATGAGTG
CGTTGTTTGT CGACACATTT TGTACTCGTC TGGCGTCGGG TGCTCGTGCG ACGAGACGCG
CAAGGCGTGC TTGCGACACG TCAACGACTT GTGCAAATGT GCGATGTCGA AGAAGACGAT
GTTTTACAGA GAAACAGTGG CTGATTTAGA AAGTCTGGTG AAGAAGACGG AGAAGGCGCT
TTCTCAGAAG GAACTAGCCA GCTTAAAATC CAAGCACAGC GACTTGGACT CAGTCACAGT
GAACAAGAAT CTCGTCAAGA AGGCTCAGGC TTGGGTGAAA CGAGTGGGCG AAGAGCTCGT
CAAACCACCT TTGCCGCCGC TGGACAAGAT GAGAAATTTA CTCGCTGCGG GTGAAGAGTT
TATTTGGGGT GGTGCTGATA TGAAGGCGGC TCGAGAAGCG TACACTCGCG TGACGAACGC
CGTCGCGTGG CAGACGAGTC TTGTGGCGCT GAAGCAAAGG CTTGGATCCA GTGCTGGTGC
CGAGGCCGCG CACGATGACG CTGGTGAAGC GCGATTGAGA TTGAACAGAC TAAAAGAGCT
CCTTGACAAC CCACCGGTAC CGATGCCTAA GGCTGATACT CAACCTTTCC GCGATTTGCT
CGCGGCGGGC TTGAAATTGG AGGAACGCAT CAAGGCGGCT CTCGCCGAGG TACCGAATCC
ATCTCCTCGC GCTTGTACGA CGCTTCAAAC TGAAGCGAAT AAGTTTGGTG TGGAAGTCCC
TTCATATAAA AAGCTGAAGG ACGTCATCGT TAGAGCAGGC GCGTGGTCCA CGAAGGTGCG
CGGCGCGCTT CCAGGACGAC GACAACTCCC GCCGCGCGAG GAACTAGCGA ATGCTCGAGA
GATCGAGGCG TTATACGAAG AGGCGCATGG ATTACCCGTT CAGCAGAGCG AACTCTTGAC
TTTGCGCAAA TCTTTAGAAG AGTTGAATTT TTGGCGCGCA AAGTCTGAGT CGCTGTTCGT
CGCCAAGGTT GACGTGGAAG AAGCCGAGGC GCTTCTCAAG GAGGGCATGG CGTTGTCAAC
AAAACTCGAC GAGGTCGACA GACTAGCCGA TCAAATCAAA GCTGTCAAAG TGTGGGCCGA
TCATGCTCGA GCGAGTGATT ATCCGGGAGC AAGAGTGACG GATTTGCACA TGCTTCTCGT
CGAGGGTGAA AAGTTTAGCG TGCGAGTGGA CGAAGTCGAG TGGTTGCGAA ACCGTATCGT
CGTCCGGGAG CTGGCAGAGA AATTGAAGGA CATGGTTTCA TCGAAGAAAT ATCCGCTCGC
CGAAGTCGAA GCGGCCGTGC GGGCGGGTAA CGAGTTCCTC GACTCCGAAG ATAAAGAGGT
TGCCCCAGAT GAAGAAGCGC TGCTGGCGCA GTGCGAGAGC CACATCAACG CGGCGAAGAA
GTGGAACGAG CGCGCGGCGG TGATGCTCAA ATCTCTCGAT AGTAAGGACC GACCGTCACT
CGAAGACGCC GCGTCGCTCA TCCGCGAAGG AAGCTCGATT CCAATCTTTC TGAATGGATT
CGACGTGCTT TCAGAAGCGG TCAATGTAGC CAAGTCTTGG TTGGATCGTG CACAACCTTG
TTTGAAGGGA AAGCAGCTCA CTCGTCGCGG TGTGTCAAAT CCGATTCCGC CGCTTTCCGA
GGCGCAAGAG CTCATGAAAG AGTCTTCGAA CTTGAAATTG TTTGTCAAGG AAGTTGAAGC
TTTGGAAGAA CGCGTCGAAG CCGCAGAAGA GTGGGACGTG GACGCGAAGG ACGCCATCGA
GCGCTGGCGA GAAGACGGCG CCGAGGTGAC GTTGACCGAG CTTGAACTTT CGCACGAAGA
CTTTGGATTA GAATTACCAG CCATGGAGAC AGTTCGCATT CGTTTAAAGT CGCTCAAGTG
GGAAGAACGC GTCGCTAAGA TCATTGCACC CAAGGCGAAG CTCGTCGAGG ACACCGTTTT
GGACGAGCTC AGGGAAGAAA TCGACGTGCT TCAAGACTTG AAAGAGGATC TTGTCGCTGA
AATCATGAAA CGGTACACGA TTGTGGACGA ATGGCGCAAG AAAGCGGATC GTTTGCTCGA
TCCTCCTCTC CTTGAAGACG GTCGATTGGC TCCGAGTGCA TCACCGGAGG AAATAGACGC
CCTCATCGCC GAAGGCAAGG CACTTCCCGC TGACGTCTCG AAGGTAGAAG ACCTCGAGGC
GTCGTTGGCG GATCACGCAC AGTGGGTCGA CACCGTTCGT AAGTGCTTGA ACAGTGTCGC
TGAAGGTCGA TCTCGCCCTT CGATTGACGA ATTATACGAT CTTCTAGCGG AGGTGGAAGA
TTTGACCTTC AAGTGCTCAG AGAGACAAGC GCTCACAAAT GCGTGCAACG CCGCCACGGC
GTGGACGGAG AGGCTCAACG CGTTGCTCTG GGCAAACGAT CAGGGTGAAG TCAAACAAGA
AAAAACGCTT ATCGAAATGT TGAGCAATGT TCTTGATTCC ATCAAAGCTG GTGTGGAAGA
CATCACCGGG ACTGGCGAAC CGCCGGAGAC GGAGGAGGGT TAG
|
|---|
| Protein sequence | MRAPSRAPCA SARPEAGVVD ALDDLAAVDA RACGIGKLTI AHDDDDDDAR GLRHRDRGAF
ALDLRAWSFT ARTQPVRALG ACARDASVDM RVPFRDEYER HRASRPDERA PRGASWRIHR
VRGWRFDLRA LYEEVKRRGG ADAIDGNQGW REVAEAIGAH GRGCAAGHAA RALHGAWLEA
FARDAKRRED AVKSAQFDAV KGEIEQDDAL AIDALCGLEF GASGAPERRV KVENVRNSCH
IFFARDRDDG ESHAFAARAT RARDDGRRDD VRLTFTARVF ATQGLDLVAS QLADAPEGDA
DCDVCGASGN EDAMILCDGC DRGSHMYCLT PKMTEVPSGE WFCGRCEEID AEVERLSADE
GTQFTLGDFN EACIEFDTAF FGEDAKRTGI DMQVIEECFW RMVEDASSVD DVCEVKCGTA
IDTTKYGSGF PRHGEALQVK IDGVSPESIK RWSESKWNLN NVARASGEKS SLLGALKDDV
AGVTTPFLEV GSTFSSTTWR REEHNMYSIT YNHWGAAKLW YCVPASAADK LEECFQKVMP
DVYEAHVNDL GSVFTMLSPS FLMSAGVPVH TLEQFPGEYV VTYPGAYYAS FNCGLNCTES
VNFVPADWLP EGSASVERNR SYAKRSLFSH DELVCRVANN PSSSIAPHLW PEIARLYAEE
ANGRAELFAS GVTRSAQMTS ADDDDDDDGC EKPRKVRSRF DDASNSGSDE CVVCRHILYS
SGVGCSCDET RKACLRHVND LCKCAMSKKT MFYRETVADL ESLVKKTEKA LSQKELASLK
SKHSDLDSVT VNKNLVKKAQ AWVKRVGEEL VKPPLPPLDK MRNLLAAGEE FIWGGADMKA
AREAYTRVTN AVAWQTSLVA LKQRLGSSAG AEAAHDDAGE ARLRLNRLKE LLDNPPVPMP
KADTQPFRDL LAAGLKLEER IKAALAEVPN PSPRACTTLQ TEANKFGVEV PSYKKLKDVI
VRAGAWSTKV RGALPGRRQL PPREELANAR EIEALYEEAH GLPVQQSELL TLRKSLEELN
FWRAKSESLF VAKVDVEEAE ALLKEGMALS TKLDEVDRLA DQIKAVKVWA DHARASDYPG
ARVTDLHMLL VEGEKFSVRV DEVEWLRNRI VVRELAEKLK DMVSSKKYPL AEVEAAVRAG
NEFLDSEDKE VAPDEEALLA QCESHINAAK KWNERAAVML KSLDSKDRPS LEDAASLIRE
GSSIPIFLNG FDVLSEAVNV AKSWLDRAQP CLKGKQLTRR GVSNPIPPLS EAQELMKESS
NLKLFVKEVE ALEERVEAAE EWDVDAKDAI ERWREDGAEV TLTELELSHE DFGLELPAME
TVRIRLKSLK WEERVAKIIA PKAKLVEDTV LDELREEIDV LQDLKEDLVA EIMKRYTIVD
EWRKKADRLL DPPLLEDGRL APSASPEEID ALIAEGKALP ADVSKVEDLE ASLADHAQWV
DTVRKCLNSV AEGRSRPSID ELYDLLAEVE DLTFKCSERQ ALTNACNAAT AWTERLNALL
WANDQGEVKQ EKTLIEMLSN VLDSIKAGVE DITGTGEPPE TEEG
|
|---|
| |