| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_19174 |
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| Symbol | PPR3_21 |
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| ID | 5006940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009375 |
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| Strand | + |
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| Start bp | 39426 |
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| End bp | 41315 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | |
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| GC content | 62% |
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| IMG OID | 640422361 |
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| Product | pentatrichopeptide repeat (PPR) protein |
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| Protein accession | XP_001422791 |
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| Protein GI | 145357164 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0365143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA ACGACGGCAC CGAACGCGAG ATCACGGTGG ACGCGCGGTT TAAGTGCGCG
AAGTGCGCGC GCGGGAGCTC GTGCTTCGCC GTGCACCGAG CGACGAGCGC GGTGAGCGGG
ATGCGAGCGA AACGGCGGTA TAACGAACGG AAAAAGGCGA AAAAGACGAA GAGTAAATAC
GCGTCGGACG TCGAGGGCGG CGGGCGAGGG TCGAGGGCGC GCGCGGACGC GGATCCGGTC
GGGGCGACGC TGGCGCTGAT ACGAGACGGA CACAGGCCGA CGGCGAAGAC GTTTACGGCG
GTGATTAGCA CGCTAGGCGC GATGGGACGC GCGAAAGAGG CTTTGGACGA TGTGTTGCCG
ATGATCGAGG AGTATGGCGA TGACGTCGAT GTGGCGGTGT GGAACGCCGT GGCGCACGCG
TTTTGCGCCG GCGGAGACCC GGCGGGGGCG GAGAAAATCG TGGATAGAAT GGTCGGCGAA
GACGGCGTGG GCGTGAACGG GGCGACGCAT CCGGAGATCA TATACACGTA CGCGAAGCGT
GGAGAGGCAA ATAGAGTGTA TAGGTTGATC AGACGAATGT CGAGCGAGCA TGGAATAATC
CCAGACGAAC GCGCGTATAA CGCGTTTTTG CGAGGCTTGT GCGAGCGGGA CGATCTCGAG
GACGCCGAGG AAGTGCTCAG ACGATGGAAC AACGAAAAGT TCGACTTGGA GCGACAGAGT
GACCGCGGTG GGCGAGTGTC GAAGCCGAGC GCGGCGTCAT ACGGGTTACT CATCGACGCG
TGGACGCGTC GCGGAAACAT GCTCGCCGCG CGCAAGCTTT TACAACAGAT GCAATGGGAG
CGCATCGCGC CCTCACTGCC GCTGTTTAAC ATGCTCATAG ACGGATACCT CAAGCAAGAA
AACATGCGCG CTGCGGAAGG GCTGTTTCGC GAGCTCGAAT CGAGTGGAAC GTGGGATATG
GAGTCGTTGG GGATCAAACC AGACAACGTG ACGTACACGT TGTTTTTAGA TTATTGGGCG
AATCAAGGCC AAGTCGACGC GTGCGAGCGA ATCTTCAATC GCATGCATCG CAAGGAAGTC
GCGCCAGACG TCACAGCTTA CGGGACGTTG GTAAAGGCGT ACGCGCGCGC GCGCGATTCC
GACGGCGCTG AGGCGGTTTT GGATCGACTC GCCGAGGCAA AGGTGGCTCC GTCGGTGGCT
ATTTACAGCG CCGTCGTCGC CGCACATTGT ACGATTGGTA ACATGTCGCG CGCGCGCGAC
GTACTCGAGC GCATGTTCGA CGCGGGCTTG CGCCCGAACG AGCGTACGTT CGCTCATTTC
GCGTGGGGAT ACGGCCAACT GGAAGACATC AACGGTATTG CCGAGGTGGC GAAGTTAATG
CTCGCGAGCG GGCTCAAACT CAAGGGTGCG AACCGCACCG CCATCGTGCG CGCGTGCGAA
GAGTGCGGAA TGAGCATGAG CGCCGTACAA GCGCTGCTGG ATCGAATCAA TCCCGAAATG
ACGCAGCGCA AGGGCGTGTG GAAACGAGAC GGCGGCGAGC CGAAACCCAA ATCCAATCGA
GCCGCCGCCG CCGCCGCCGA CGAGGACCTC GAACCGTCAA CGCTCGAACC GACGAAGACG
AAAGAAATCT ACGGAGGTCC GGAGTCCACC GCGCGTCGGG TGTCGCTTTC CCAGCGTGTA
GAGTCCCTCG ACGAAGACGA CGACGACGGC GATACGGGCG CCGTGGACGC GCCGCCGGCG
AGCTCGGATT GGCCTCGCAA AGTCTCCACT CGCGCCGTCG CCATCGCGCA CCGCGCGTCC
TCGCGCGCGC GCCCTATCCG TCGCACATTT ACACGAACGA ACGCGCGCGC GTTCGCGATC
ACGCGAGCCC TCGGCGCTGC TTCGATGTAA
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| Protein sequence | MTMNDGTERE ITVDARFKCA KCARGSSCFA VHRATSAVSG MRAKRRYNER KKAKKTKSKY
ASDVEGGGRG SRARADADPV GATLALIRDG HRPTAKTFTA VISTLGAMGR AKEALDDVLP
MIEEYGDDVD VAVWNAVAHA FCAGGDPAGA EKIVDRMVGE DGVGVNGATH PEIIYTYAKR
GEANRVYRLI RRMSSEHGII PDERAYNAFL RGLCERDDLE DAEEVLRRWN NEKFDLERQS
DRGGRVSKPS AASYGLLIDA WTRRGNMLAA RKLLQQMQWE RIAPSLPLFN MLIDGYLKQE
NMRAAEGLFR ELESSGTWDM ESLGIKPDNV TYTLFLDYWA NQGQVDACER IFNRMHRKEV
APDVTAYGTL VKAYARARDS DGAEAVLDRL AEAKVAPSVA IYSAVVAAHC TIGNMSRARD
VLERMFDAGL RPNERTFAHF AWGYGQLEDI NGIAEVAKLM LASGLKLKGA NRTAIVRACE
ECGMSMSAVQ ALLDRINPEM TQRKGVWKRD GGEPKPKSNR AAAAAADEDL EPSTLEPTKT
KEIYGGPEST ARRVSLSQRV ESLDEDDDDG DTGAVDAPPA SSDWPRKVST RAVAIAHRAS
SRARPIRRTF TRTNARAFAI TRALGAASM
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