| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_8942 |
|---|
| Symbol | |
|---|
| ID | 5006792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 396653 |
|---|
| End bp | 397048 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640422213 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422577 |
|---|
| Protein GI | 145356726 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00926438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.133219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GAACGCGTGC GCCTCGGCGT GTGCATCGGC GAGTTTCATA ATAAACTCAT GGATCGCATG
CTCGAGGACG CGCGCGTGAG CGCGGAGGCG ATGGGAGCGA CGATCGATAA GGTGGTGTGG
GTGCCGGGGA CGTACGAAGC GCCGCTGGTG GTGGAGAATA TGTTGCAGGA TCCGACGCTG
GACGCGTGCG TCGTGTTGGG ATACATCGAA AAGGGATCGA CGCTGCACGG GCAAGAGATG
GGGGCGACGT TTTCCATCAT CGCGAAGCAA TTAGAGTTAG AGTATGGGAA ACCGGTGGGA
ATGGGGATCA TCGGACCGGG CGCGACGGCG GAACAGGCGG AGATGCGCGT GGCGTACGCG
GGCAACGCCG TTCGCGCGAG CGTGCGCATG GCGAGA
|
|---|
| Protein sequence | ERVRLGVCIG EFHNKLMDRM LEDARVSAEA MGATIDKVVW VPGTYEAPLV VENMLQDPTL
DACVVLGYIE KGSTLHGQEM GATFSIIAKQ LELEYGKPVG MGIIGPGATA EQAEMRVAYA
GNAVRASVRM AR
|
|---|
| |