Gene OSTLU_7961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_7961 
Symbol 
ID5006587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp229255 
End bp229791 
Gene Length537 bp 
Protein Length179 aa 
Translation table 
GC content56% 
IMG OID640422008 
Productpredicted protein 
Protein accessionXP_001422689 
Protein GI145356957 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5249] Golgi protein involved in Golgi-to-ER retrieval 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.2978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGCCGTTGG CGCGCGCGCA GGCGAAACTC GCGCAGCGTC TTCAAATCTT TCTCGATAAA 
TCTGTCCCGA AGCGCGCCGA ACGGTGGAGC GCGTACGCGT GCGTCGCGCT GGTGTACGCG
ATTCGCGCGT ACTTTCTGCG GGGGTACTAC ATCGTGACGT ACGGGCTGGG GATCTATAAC
CTGAACCTGT TGATTGGATT TCTGAGCCCG CGAAACGATC CCGAATCGCT GCGCGCGTCG
AACGACGGCG ACGATGGACC GTCGCTGCCG ACGAGCAACG AACAAGAATT CAAACCGTTC
GTGCGGCGAT TGCCGGAGTT TAAGTTTTGG TGGATGAGCT TGAAGTCGAT CGGGACGGCG
TTCGCGATGA CGTTTATGCC GATGTTCGAC ATACCGGTGT TTTGGCCGAT TTTGTTAATG
TACTTCATCA TGTTGTTTTT CATGACGATG AAACAGCAGG TGAAGCACAT GATTAAGCAT
AAATACGTGC CGTTCACGAC GGGGAAGCCG AAGTTTGCGG GCGCGAGCGC GGGCGGG
 
Protein sequence
SPLARAQAKL AQRLQIFLDK SVPKRAERWS AYACVALVYA IRAYFLRGYY IVTYGLGIYN 
LNLLIGFLSP RNDPESLRAS NDGDDGPSLP TSNEQEFKPF VRRLPEFKFW WMSLKSIGTA
FAMTFMPMFD IPVFWPILLM YFIMLFFMTM KQQVKHMIKH KYVPFTTGKP KFAGASAGG