Gene OSTLU_48109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_48109 
SymbolpsbP 
ID5006819 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp470035 
End bp471283 
Gene Length1249 bp 
Protein Length249 aa 
Translation table 
GC content64% 
IMG OID640422240 
Productoxygen evolving enhancer 2 of Photosystem II 
Protein accessionXP_001422601 
Protein GI145356775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.124849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GATGTTCACG CTCTCCACCA CCCTCGCGCA CGCCGCCGTC AAGGCGAACG TCAAGGCGAC 
GCGTAAATCG CAATCGCGCC GAGGCGCCGT CAAGGTCGCC GCGCAGGCGC CCGACGCGTC
GAGCCGTCGC GAAGCCATGA GTCTCATCGC GGTGCGTCCG AACGCGACGA CGCGATCGAG
CGCGCGATGC GCGCGCCCGC GCGCGACGCG CGACGCGCGG GACGACGCGG GACGACGCGG
GACGACGCGC GGAATTATTG TCGAGCGAAC CGGCGCGCGA GGGCGCGGAG AGACGCGCGC
GCGACGCGTC GAGGACGCGA CGCGCGCGAC ATCATCCAAC GAGATACTGA CGATCGCGCG
GCGTGCGGTT TCATCGAACG CAGGGCGCGA CGACGCTCGC GATGTCCAAG CCGGCGTTCG
CGGCGTACGG TGACTCGGCG AACGTTTTCG GCGGCGTGTC GAACCCGACC GGTGCGTGCG
CGCGCGAGGC GCGAGGCGCG CGCGAGGCGC GCGCGAGGCG CGAGCGATCG TATCGACCCG
AGATACGATT CGCGCGTGAT CCGGGACCGA TGGGTCGTGA TGTCGTGTGG GTAAACAGTG
AGACTGACGA GACGCGCTAC TTTCGCGAAT GCAGGTTTCG TCCCGTACGC CGGCGACGGC
TTCGCGTTCT TGTTGCCGAG CAAGTACAAC CCGAGCAAGG AACGCCCGTT CCCGAACACG
GAGTGCTATT TCGAGGATAA CTTTGACCAA GTGACGAACA TTTCCGTAAT CGCCGAAAAA
GCCGAAAAGG GGAGCATCGA CGCGTACGGC AAGCCGGAGC AATTCTTGGA AAAGCTTGGG
TACTTATTGG GCGTGCAATC GTACGCCGGG CAAACCCGCT CCGAAGGGGG GTTCGCGGCG
AACAAGGTTT CCACCGCCGC CGTGCTCGAC GTGTACACGC GCGAAAACAA GGGCAAGACG
TACTACCAAT ACGAAATTCT CACGCGCACC GCGGACGGCG ACGAAGGCGG ACGCCACCAG
TTGATCACCG CCACCGTGAG TGATGGGAAC TTGTACATCA TGAAGCTTCA ATCGGGTGAC
AAGCGTTGGT TCAAGGGTCA AGAGCGCGAC CTTCGCACCG CGATGAACTC GTTCACCGTG
GCGTAAGCGA GCGCGCCGCT CGCCGCGCCC GCCACACACA TATAGTTCCG CGACGTTTTA
AACGCGAAGC AACCATAGCA CGTGTTATGA AAGATGAACA TCACCACAC
 
Protein sequence
MFTLSTTLAH AAVKANVKAT RKSQSRRGAV KVAAQAPDAS SRREAMSLIA GATTLAMSKP 
AFAAYGDSAN VFGGVSNPTG FVPYAGDGFA FLLPSKYNPS KERPFPNTEC YFEDNFDQVT
NISVIAEKAE KGSIDAYGKP EQFLEKLGYL LGVQSYAGQT RSEGGFAANK VSTAAVLDVY
TRENKGKTYY QYEILTRTAD GDEGGRHQLI TATVSDGNLY IMKLQSGDKR WFKGQERDLR
TAMNSFTVA