Gene OSTLU_43906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43906 
Symbol 
ID5006800 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp422940 
End bp423959 
Gene Length1020 bp 
Protein Length315 aa 
Translation table 
GC content62% 
IMG OID640422221 
ProductMC family transporter: peroxisomal membrane protein 
Protein accessionXP_001422587 
Protein GI145356747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0187062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCG TGGACGCCAG AGACGACGTC GTCGAAGCCG CCGCCGGCAC GCTCGGCGCG 
TTATTAGCGC TCGTGACCAC GTACCCACTC ATCACCCTGA ACACGCGACA ACACGTCACG
CGACGCCGCG AACGCGACGG CGACGACGGC GACGACGCGC CGAGCACGTC CTCGCTTTCG
TCCATGTACG ACGGCATCGA ACCCGCGCTG GTCGGGACGG CGTGCAGCCA AGCGGTGTAC
AACTACTGGT ACTCGCGCGC GAACGGGACG TATCGAGCGA GACGCGGAAG GGACGCCACG
GGGGCGGCGA GCTTGGCGAT CGCGTCGTTC GCGGGATGCG TGAACGTGCT GATGACGCTG
CCGATATGGA CGATCGTGAC GAAGATGCAA GCGGACGTGC GAAGGCGAGA GAACGATCGG
GATGACGGGG AGGAGGCGGC GTCGGTCGAG CGGGACGTCG ACGCGGAGAC GGCGGCGGCG
AAGCTACGAT CGGCGACGAG TGAAGGAGGG AAGAAAAACG GAGATCAAAA CGGGAGCGGG
AAGAAGAAAC GTTCGTTCTT CGACATCGCG CGCGAGGTGG TACGGGATGG TGGCGTGTGC
GGATTATGGC AAGGGTTGAC CCCGTCGCTC GTCATGGTGG CGAATCCCGC GTTGCAGTAC
GCGTTTTACG AAACCGTCGC CAAGTGGAGG CTCAAACGCG ATCGTAAAAC GACGTTAAGC
GCGCCTGAAA TTTTTGTATT CGGCGCGTGC GCCAAATTTG GCGCCACGAT GTTAACCTAC
CCCTTGATGG TCGTCAAATC TCGTCTCCAA GTCGTCTCCA AAGACATGGC GGACGACCGC
ATGCGCTACC GCGGCACAGC GCACGCCGTC CGATGCATGG CAGCCGAGGA AGGTTTGGGC
GTTTTTTACA AGGGCATCGA AACCAAGCTG ACACAGACCA TCCTAGCCGC CGCGTTGATG
TTCACCGTGA AGGAGAAGCT CGCCGAGAGC GTCTACGCCG CGCGTCGCGT CCTCGTCTAG
 
Protein sequence
MPPVDARDDV VEAAAGTLGA LLALVTTYPL ITLNTRQHVT RRRERDGDDG DDAPSTSSLS 
SMYDGIEPAL VGTACSQAVY NYWYSRANGT YRARRGRDAT GAASLAIASF AGCVNVLMTL
PIWTIVTKMQ ADTAAAKLRS ATSEGGKKNG DQNGSGKKKR SFFDIAREVV RDGGVCGLWQ
GLTPSLVMVA NPALQYAFYE TVAKWRLKRD RKTTLSAPEI FVFGACAKFG ATMLTYPLMV
VKSRLQVVSK DMADDRMRYR GTAHAVRCMA AEEGLGVFYK GIETKLTQTI LAAALMFTVK
EKLAESVYAA RRVLV