Gene OSTLU_43894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43894 
Symbol 
ID5006609 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp322725 
End bp323499 
Gene Length775 bp 
Protein Length214 aa 
Translation table 
GC content58% 
IMG OID640422030 
Productpredicted protein 
Protein accessionXP_001422551 
Protein GI145356672 
COG category[S] Function unknown 
COG ID[COG5230] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.123088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00246987 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGAGCA CGAGCTTCGG CAAGAAGGCG TGCGAACTCG TGCGAGAGAT CGCGGAGAGC 
GAGGCCGGGA CGCTACCGCC GTACAATCAG GATTTAATGC GCACGATCGC CGATCAGTGC
GCGGACCACG GCGAGGCTAT GCAGACGCTG GCGGTTCAGA TTAACGAAGT GAACGACGCC
GAGGACGACG GCGCCGAGGA CGCGGACGCG AGAGAAGATA AGACAGGGTC GTTGCGCACG
GGGATGTTCG CGCATCATCA GGTGAGCGCG AGAGATGCGG GAATCGAGGC GGCGAATCGA
AGACGCGCGA GACGCGAGCG AAACGAATCA AACGAACGAA CGAACGAACG AACGACGAAC
GAGCGACTGA CTGCGTTTGC GTCGCGAATA GGCGATATTG CGGAATAAAC GCGCGATGTT
GGTGTACCTG AACGAGCGCA TGAACAGGAT AAAAGATCTT CGATGGCAAA TCGGCACCGG
TTTGCCGGAC AACGTGTCCT CCAACCTGAG TCACGGCGAA CGCGCCTTCT TCACCAAGTA
CTCGGAAAAT CTGAACGAAT ACATGCGAGA GGTGGATTTG AACTTGACGT TAGATTTAGA
ACCGCCGAAG CATCACAAGA TACAGGTGCG ATGCTTGGAA GATCGCGGGG AGTTGTTCAC
CAGGGACGGC TCGGTGGATC TCAAGCGCAA CACGGTGCAC TTGATGTGGA GAGAGGAAGC
GCAGCCGCTC ATCCGCGAGG GCGTCCTCGA GCAGCTCGAC GACGATGGGT GTTAG
 
Protein sequence
MASTSFGKKA CELVREIAES EAGTLPPYNQ DLMRTIADQC ADHGEAMQTL AVQINEVNDA 
EDDGAEDADA REDKTGSLRT GMFAHHQAIL RNKRAMLVYL NERMNRIKDL RWQIGTGLPD
NVSSNLSHGE RAFFTKYSEN LNEYMREVDL NLTLDLEPPK HHKIQVRCLE DRGELFTRDG
SVDLKRNTVH LMWREEAQPL IREGVLEQLD DDGC