Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43894 |
Symbol | |
ID | 5006609 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | + |
Start bp | 322725 |
End bp | 323499 |
Gene Length | 775 bp |
Protein Length | 214 aa |
Translation table | |
GC content | 58% |
IMG OID | 640422030 |
Product | predicted protein |
Protein accession | XP_001422551 |
Protein GI | 145356672 |
COG category | [S] Function unknown |
COG ID | [COG5230] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.123088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00246987 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCGAGCA CGAGCTTCGG CAAGAAGGCG TGCGAACTCG TGCGAGAGAT CGCGGAGAGC GAGGCCGGGA CGCTACCGCC GTACAATCAG GATTTAATGC GCACGATCGC CGATCAGTGC GCGGACCACG GCGAGGCTAT GCAGACGCTG GCGGTTCAGA TTAACGAAGT GAACGACGCC GAGGACGACG GCGCCGAGGA CGCGGACGCG AGAGAAGATA AGACAGGGTC GTTGCGCACG GGGATGTTCG CGCATCATCA GGTGAGCGCG AGAGATGCGG GAATCGAGGC GGCGAATCGA AGACGCGCGA GACGCGAGCG AAACGAATCA AACGAACGAA CGAACGAACG AACGACGAAC GAGCGACTGA CTGCGTTTGC GTCGCGAATA GGCGATATTG CGGAATAAAC GCGCGATGTT GGTGTACCTG AACGAGCGCA TGAACAGGAT AAAAGATCTT CGATGGCAAA TCGGCACCGG TTTGCCGGAC AACGTGTCCT CCAACCTGAG TCACGGCGAA CGCGCCTTCT TCACCAAGTA CTCGGAAAAT CTGAACGAAT ACATGCGAGA GGTGGATTTG AACTTGACGT TAGATTTAGA ACCGCCGAAG CATCACAAGA TACAGGTGCG ATGCTTGGAA GATCGCGGGG AGTTGTTCAC CAGGGACGGC TCGGTGGATC TCAAGCGCAA CACGGTGCAC TTGATGTGGA GAGAGGAAGC GCAGCCGCTC ATCCGCGAGG GCGTCCTCGA GCAGCTCGAC GACGATGGGT GTTAG
|
Protein sequence | MASTSFGKKA CELVREIAES EAGTLPPYNQ DLMRTIADQC ADHGEAMQTL AVQINEVNDA EDDGAEDADA REDKTGSLRT GMFAHHQAIL RNKRAMLVYL NERMNRIKDL RWQIGTGLPD NVSSNLSHGE RAFFTKYSEN LNEYMREVDL NLTLDLEPPK HHKIQVRCLE DRGELFTRDG SVDLKRNTVH LMWREEAQPL IREGVLEQLD DDGC
|
| |