| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43520 |
|---|
| Symbol | CCSA |
|---|
| ID | 5006532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 83009 |
|---|
| End bp | 83896 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640421953 |
|---|
| Product | plastid-localized, cytochrome c assembly protein |
|---|
| Protein accession | XP_001422474 |
|---|
| Protein GI | 145356516 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.635998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTCG GGAACGCGTC GCTGTTCGGA CTGCTCGCGG CGCGGTGGAT CGAGAGCGGA
CACTTTCCGC TGAGTAATAT GTACGAGTCG CTGTTGTTTC TGGCGTGGGG GATCACGGCG
GTGCACCTGG TGGTGACGGA GCGCGACGGG TTCTCGGAGA GCGCGATTCC GGGGGCGCTC
GCGGGACCGA CGGCGGCGCT CACGGTGGCC GGGGCGACGT TAGCGCTGCC GGCGGAGCTG
CAGCGCGCCA CCGCGCTCGT GCCGGCGTTG AAGAGTAATT GGTTGATGAT GCACGTGAGC
GTGATGATGC TGAGTTACGC CACGTTACTC GTCGGTTCGT TGTCGTGCGT GTCGTATTTA
GTCGTCGACG CGTCTCAGGA TTGGGCCGCG GCGAAGGGGG CGCTGGAGAA GCTCGATAAG
ATGGTGTCCA ACGACGGCGA GCGCGTGAGA AATAGGCCAA AAGTGAGCGT CGCCGCCGAC
GGCGAAACCG TGGCGGTGGA GACGATGAAC GCGAGCGAGG ATTACGGCGG CGAGCTCGCC
ATCGAGGCGA CGCGCGACGG CGAACGCATC CTCACCGAGA TGGACAACTT GGCCTACCGT
TGCTTGGGCG CCGGTTTCAC TTTGCTCACC GCGGGTTTGG TTTCCGGCGC GGTGTGGGCC
AACGAAGCCT GGGGTTCGTA CTGGTCCTGG GATCCGAAGG AGACGTGGGC GCTCATCACC
TGGCTCGTGT ACGCCACGTA TTTGCACTCG CGTCTCGTCG CCGGTTGGAG TAAAAAGGAC
TCGTGCGCCG TCGGTGCCGC GGGCTTTTTG GTCGTTTGGG TGTGCTACGT CGGCGTCAAC
CTCTGGGGCG TCGGCTTACA CTCGTACGGT TGGTTCGCCA ACAAGTAA
|
|---|
| Protein sequence | MYVGNASLFG LLAARWIESG HFPLSNMYES LLFLAWGITA VHLVVTERDG FSESAIPGAL
AGPTAALTVA GATLALPAEL QRATALVPAL KSNWLMMHVS VMMLSYATLL VGSLSCVSYL
VVDASQDWAA AKGALEKLDK MVSNDGERVR NRPKVSVAAD GETVAVETMN ASEDYGGELA
IEATRDGERI LTEMDNLAYR CLGAGFTLLT AGLVSGAVWA NEAWGSYWSW DPKETWALIT
WLVYATYLHS RLVAGWSKKD SCAVGAAGFL VVWVCYVGVN LWGVGLHSYG WFANK
|
|---|
| |