| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43499 |
|---|
| Symbol | |
|---|
| ID | 5006513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 28316 |
|---|
| End bp | 29704 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640421934 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422455 |
|---|
| Protein GI | 145356476 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TCGGTCTCCC CACGACGTCC GCGCGCGCGC TCACGCGCGT CGAACGCGTC
GGCGCGCACT CGCACGTGCG CGGCCTCGGA TTGGATGACG CGCTCGATGC GAAGAAATCG
TCCCAAGGCT TGGTTGGACA GGTGAAAGCG CGCAAAGCCG CGGGCGTGAT CGCGAATATG
ATACGCGACG GCACGATCGC CGGGCGCGGG GTGCTGATCG CGGGCGCGCC GGGGACGGGG
AAGACGGCGA TCGCGCACGG AATGGCGAAG ACGCTCGGCG AGGAGACGCC GTTCGCGTCC
ATGGCGGCGA GCGAGATATT CTCGATGGAG ATGTCCAAGA CGGAGGCTCT GACGCAGGCG
TTCCGCAAGG CGATCGGGGT GAGGATAAAG GAAGAGACTG AGATCATCGA GGGAGAGGTG
GTGGAGATTG AAATCGATAA ACCGGTGGGA GCGCTCGCGA GCGCGCGCGC CAAGACGGGC
AAGTTGACCA TGAAGACGAG CGATATGGAG ACAGTGTACG ATTTGGGAAC GAAGATGATC
GATGCCATCA GTAAGGCAAA GGTGAACGCC GGGGATGTGA TCAACATCGA TAAGGCGAGC
GGAAGAATTA CGAAAATTGG GCGGTCGTTT TCGCGGTCGA GAGACTACGA CGCCATGGGG
GCGACGACCA AGTTTGTGGC GTGCCCGGAA GGGGAGCTTC AAAAGCGTAA AGAGGTGGTG
CACACGGTGT CGCTGCACGA AATCGATGTC ATCAACTCCC GCACGCAAGG TTTCCTCGCC
CTTTTCGCCG GAGACACGGG GGAAATCCGA GCAGAGATTC GCGAGCAAAT CGACAATAAA
GTTTCCGAGT GGAAGGAGGA GGGCAAGGCT GACATCATCC CGGGCGTGCT TTTCATCGAC
GAAGTGCACA TGCTCGATAT CGAGTGCTTT TCTTTCTTGA ACCGCGCGTT GGAGAACGAG
CTGGCGCCCA TTTTAGTCGT CGCCACCAAC CGCGGCATCA CGAAGATTCG AGGCACCGAG
TTCCGCTCGC CTCACGGTAT CCCGATCGAT CTTCTCGATC GTTTGTTGAT CATCCACACC
CAAGCTTACG ACGAGCGCGA GATGAAGGCA ATTTTGGAAA TCCGCTGCGA AGAGGAAGAC
GTCGATCTCG CCGACGACGC CAAGGATTTG TTGTGCAAAA TCGCGTGCGA AACCAGTTTG
CGTTACGCCA TTCAACTCAT CTCTGCCGCC TCGCTTCGCG CGAGCAAGCG CAAATCCGCC
AAGGTGGACG TCGATGACGT GAGCAAGGTG TACGGGATGT TCTTAGACGT CAAGCGTTCG
ACGCAGTTCA TGCTCGATTA TCACCAAGAC TACATGTTCA ACGAAACCGA CACCGCCATG
GAGGCGTGA
|
|---|
| Protein sequence | MTDIGLPTTS ARALTRVERV GAHSHVRGLG LDDALDAKKS SQGLVGQVKA RKAAGVIANM
IRDGTIAGRG VLIAGAPGTG KTAIAHGMAK TLGEETPFAS MAASEIFSME MSKTEALTQA
FRKAIGVRIK EETEIIEGEV VEIEIDKPVG ALASARAKTG KLTMKTSDME TVYDLGTKMI
DAISKAKVNA GDVINIDKAS GRITKIGRSF SRSRDYDAMG ATTKFVACPE GELQKRKEVV
HTVSLHEIDV INSRTQGFLA LFAGDTGEIR AEIREQIDNK VSEWKEEGKA DIIPGVLFID
EVHMLDIECF SFLNRALENE LAPILVVATN RGITKIRGTE FRSPHGIPID LLDRLLIIHT
QAYDEREMKA ILEIRCEEED VDLADDAKDL LCKIACETSL RYAIQLISAA SLRASKRKSA
KVDVDDVSKV YGMFLDVKRS TQFMLDYHQD YMFNETDTAM EA
|
|---|
| |