Gene OSTLU_29489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29489 
Symbol 
ID5006613 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp332264 
End bp333213 
Gene Length950 bp 
Protein Length230 aa 
Translation table 
GC content55% 
IMG OID640422034 
Productpredicted protein 
Protein accessionXP_001422716 
Protein GI145357011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0917049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00248784 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGAACGA TTGCGAACGA ACGCGACGCG CTCGCGGCGA CGGAGGCGCG CGCGGCGCGC 
GCGATCTTAG ATCATCGATT GGGGATAATC GATGATGATC AACGGGCGAG GCGAGCGGCG
CTCGTCGCGA AACAGTTTGC CGAACGCGAG GCGTTGGCGA TCGACGAGGA GTTGGACGAG
CCGTTCGACT TGCACGAGCT GTACGCGTTC CTGATGATGC CCGCGGACAA AGTCGCGAAG
GCGTTTGGGA TGCCCTCTGG ATCATTCAGG CTGCAGTACG TCAAAGCGCA CGTGTCTTTC
GTCGCTTTAT TGTGTTTTTG AGCCCAGCGC GCGATTTTTT TTTGACTTTT TTGAGAGTCT
TTGTCGCTCG CACGGACCGC GTGACTGACG ATGCGCGTCT GGTTCGCGGT GAGTGTAGGT
GTAGAAAAGC GGGCGTAACG CGATGGCCGC ATCGTCACGC GCAAGCGGTG GTGGGTTGCC
ACGAATACAT TGCGCAGCTC ATGCAGGTGC GACGGGACGA GCGATGCGAG CGATACGACT
ACACGCGAGT CGTGATTTCG ACGACGCACG GAGAGATTGA TGACTGACTA AAGTAACAAT
ATGCGTGCGT GACACGATAG CATACGTTGG CGCAGTTTGA ATACAGCATC GATGATATGG
AGATGTGCGA TGTGAATTAT TATTCGCACC GTGCGCGCTC GGCGTTTCTC AGGATGGATT
ACGCTATGAC GGATTTGCTG GAAGATCTTG ACACTCTAGA AAAGTACGCG CGCGCGCTAG
AAGGAATGTT CTTACGCACT GGAACATTCG ATTCTGTCCG CTCACCGGAG GCATTCAACA
GAATCCGGAC GAAAATTTAC AAGCACCGTT CGAAAGTGGG TTGCTTTGTG AGGAAGTTGT
TCCCGTCGAA TCTTGGCGGC GCGATTCGCC CATCACTATT TGATAAGTGA
 
Protein sequence
MRTIANERDA LAATEARAAR AILDHRLGII DDDQRARRAA LVAKQFAERE ALAIDEELDE 
PFDLHELYAF LMMPADKVAK AFGMPSGSFR LQCRKAGVTR WPHRHAQAVV GCHEYIAQLM
QHTLAQFEYS IDDMEMCDVN YYSHRARSAF LRMDYAMTDL LEDLDTLEKY ARALEGMFLR
TGTFDSVRSP EAFNRIRTKI YKHRSKVGCF VRKLFPSNLG GAIRPSLFDK