Gene OSTLU_29448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29448 
Symbol 
ID5006593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp254836 
End bp255507 
Gene Length672 bp 
Protein Length223 aa 
Translation table 
GC content68% 
IMG OID640422014 
Productpredicted protein 
Protein accessionXP_001422535 
Protein GI145356639 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0659224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.151084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCC ACGCCGTGCG CCTCGACCCC GGTCAGGACT TGAAGCGGTC CCTGTTGGAG 
TACTGCAGCG CGCAGAACCT CGCCAGCGCG TGGATTCTCA CCGCCGTCGG CTCTCTGCGC
GCCGCCAACA TCCGCTTGGC CCACCACGAC AAGTTTCTCG GCGCCGGCGC GAACGCCGTC
CTGGCGCTTC CCGATCAAAA GTTTGAGATC TGCTCGCTCG TCGGAACGAT ATCGCGCGCG
GGCGCGAGCT GTCACCTGCA CGTCTCGCTC GCGGACAGGC GAGGGGACTG CGTCGGGGGA
CACGTGCTGG AGGGCAACGT CGTGTTCACG ACGTGCGAAA TCGTGCTCGG AAGCTCGTCG
ACGATGGCGT TCGATCGCGA GCTGGACGAG AGGACCGGAT TCGATGAGCT CGTGGTGCGA
GAGGCGGGCG CGGGGGCGGA GACGGGGGCG GGAGAGACGA GAGGAAAGAC GGCGCGAAGA
GCGCGACAGT TACGAGCGGA GGCTCGCGAA CGCGAGCTTC GCGCGGCGGC GGGGGAACGC
GAGCGGGCGC GAGGGTTGTT CGAGTGGTTA GTGAAGGTCA TCGTGCCGAA ACCTGGTGCG
AGGCGCGCGG AGTCTGATGA AGAAGAGGAG GGGGAGGAGG AGGAAGGCGC GGCGGCGGAC
GCGCCGCGAT GA
 
Protein sequence
MRVHAVRLDP GQDLKRSLLE YCSAQNLASA WILTAVGSLR AANIRLAHHD KFLGAGANAV 
LALPDQKFEI CSLVGTISRA GASCHLHVSL ADRRGDCVGG HVLEGNVVFT TCEIVLGSSS
TMAFDRELDE RTGFDELVVR EAGAGAETGA GETRGKTARR ARQLRAEARE RELRAAAGER
ERARGLFEWL VKVIVPKPGA RRAESDEEEE GEEEEGAAAD APR