Gene OSTLU_29447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29447 
Symbol 
ID5006751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp253992 
End bp254762 
Gene Length771 bp 
Protein Length256 aa 
Translation table 
GC content67% 
IMG OID640422172 
Productpredicted protein 
Protein accessionXP_001422534 
Protein GI145356637 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.4675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.145463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCGG GGTTGGAGTT CACGAGCGAC GTCATCGAGG CGGAGAGGAA CGGCGAGGCG 
TGCGCCGGCG GGATGTTCGT TCCGAACGGC GTCGTCGTGG ACGCGCCGAG ATATTTAACC
GCGCTCTGGG ACGCGTGCGG CATACTCGCG TCGCGCGGCG CGGCGGGCAC GCGCGCGACG
TTGCGCATCG CCGAGGTCGA CGATGTGAAG GCGCTGTTGG ATGAATTCGA TCAAGTGGCG
CTGTGTTGCG GCGCCGGCGT CGCCGCGCTC TTTGACTTTG AAACGATCCC GGTGTCGTTG
CAAGGCGGGC ACGTGCTCGA GCTCAAGCCC GAGGGCCTGA GCGTGGGCAT TTTAGGCACC
ACGTACGTCG CACCGCTCGG CGACGATCGC GCCATGATCG GTCCGACGAA AGAGTACGAC
GCCACGCCCG AGGATTGCGC TCGCTCTGGC GTCGTGGACG ACGTCGACGA CGAACGATCC
GCGCGCGCGA TTTCAGAGCT TCGCGAGCTC GGCGCGCGCG CGTACCCGCC GTGCGCGAAT
TGGGAATTCT TGCGTCTCAA GTACGGCGTG CGCGCCAATC CACCGCGCAC GCACGCCGGC
GCGCTTCCGC TCGCGGGATC CGTCCACGTG GACGGCCGCC GATGTTGGTT CGCCGCCGGC
CTCGGCGCGC GCGGTCTCAT CTACCACGGC CTTCTCGCCG ACTGGCTCTC GAGCGCGATT
CTAGACGACG ACATAAACGC CATACCCGTA GACGTCCGTC GGACGTGTTA G
 
Protein sequence
MCPGLEFTSD VIEAERNGEA CAGGMFVPNG VVVDAPRYLT ALWDACGILA SRGAAGTRAT 
LRIAEVDDVK ALLDEFDQVA LCCGAGVAAL FDFETIPVSL QGGHVLELKP EGLSVGILGT
TYVAPLGDDR AMIGPTKEYD ATPEDCARSG VVDDVDDERS ARAISELREL GARAYPPCAN
WEFLRLKYGV RANPPRTHAG ALPLAGSVHV DGRRCWFAAG LGARGLIYHG LLADWLSSAI
LDDDINAIPV DVRRTC