Gene OSTLU_29422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29422 
Symbol 
ID5006742 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp206338 
End bp206857 
Gene Length520 bp 
Protein Length87 aa 
Translation table 
GC content64% 
IMG OID640422163 
Productpredicted protein 
Protein accessionXP_001422520 
Protein GI145356609 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00200613 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCA AGGTGCAGCG CATCATGACC CAGCCGATCG TGCGTTTCGA CGCGACGCGA 
CGACGCGCGC GACGACGCGA CCGCGACGCG ACCGCGACGC GCGACGCGAC CGCGCCTCGA
CGCGACCGCG ACGCGCGCCT CGACGCGAGC GCGACGTCGA CGGGACGCGC GCGGACGCGA
ATTCGAGAAT TCCTCTAGGG TAGCCGCGCC GCGCGTCGAC GCGAATCGAA CGAAATCGAG
CCGACGCGAC GGACCGAACG ACTGACGACG GCGCGATGAC GCGTCGCGCG GACAGAATTT
GATCTTTCGG TTCCTGCAGA CCAAGGCTCG GGTGCAGATT TGGATGTACG AGAATCCGGA
CACGTGCGTC GAGGGACGAA TCGTCGGCTT CGACGAGTAC ATGAACTTGG TGTTGGACGA
CGCGGAGGAG GTGACGGAGA AGAAGTCGCG TCGCGTCGGC GTGGGGAGGA TTTTGTTGAA
GGGGGATAAC ATCACGTTGA TGCGAAACGT GAGCAAGTGA
 
Protein sequence
MATKVQRIMT QPINLIFRFL QTKARVQIWM YENPDTCVEG RIVGFDEYMN LVLDDAEEVT 
EKKSRRVGVG RILLKGDNIT LMRNVSK