Gene OSTLU_29372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29372 
Symbol 
ID5006552 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp123639 
End bp124625 
Gene Length987 bp 
Protein Length278 aa 
Translation table 
GC content60% 
IMG OID640421973 
Productpredicted protein 
Protein accessionXP_001422659 
Protein GI145356896 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACG CCTCCGTCGT GAGCGCGGCG CTGCAGACGC TCGTGTACGG CGGCGCGGCG 
TCGTACGGGC TGTACAACAG GTGCGCGGGC GCGCGACGGC GCGCGCGACG CGCGAAGGCG
CGCGCGAATG AAATGAATTA GGGTGACGGC GATTCGCGCG CGACGACGCG ACGACGCGAC
GACGCGACGA CGCGACGACG GAGGACTGAC GGAGGGCGAC GCGCGAACAG TCTGTTCAAC
GTCGAGGGCG GGCACCGGGC GATCGTGTAC AATCGATTCG TCGGGGTGAA GGACAAGGTG
TACGCGGAGG GGACGCACTT CATGATCCCT TGGGTCGAGA GGCCGTACGT GTACGACGTC
AGGGCGCGCG CGCATCAGGT GAACTCGCAG AGCGGATCGA GAGATTTGCA GATGGTGAAC
ATATCGATTC GCGTGCTGAC GCGGCCGGAC GCGGGTAAGC TGCCGGAGGT GTATCGAACG
CTCGGGATGG ATTTCAACGA ACGCGTGCTG CCGAGCGTGA TTCACGAAAC GGTGAAGAGC
GTCGTGGCGC AACACAACGC GAGCGAGTTG ATCACGAAAC GGGAACAAGT GTCGTTGTCT
ATTAGACATC TTTTGAAGCA GCGAGCGGCG CAGTTTAATA TGGTGCTAGA CGACGTCTCG
CTCACGGCGT TGACGTTTGG GAGAGAGTAC ACCGCGGCCA TCGAGAGTAA GCAAGTGGCG
CAACAGGAGG CGGAGCGCGC CAAGTTCGTC GTCGATAAGG CGAGACAAGA CAAGCTTTCG
GCGGTGATTC AGGCGGAGGG TGAAGCGAAA TCCGCCAAGC TCATCGGCGA AGCCATCGCG
AACAATCCGG CGTTTTTAAC CTTGCGTAAA ATTGAAGCCG CGCGCGCCAT CGCTCAAACC
ATGGCCAACT CCAACAATCG CGTCATGCTC AGCGCGGATT CTCTGTTGTT GAACCTTCAA
GACGACAAGC CTGCCGATAA GAAGTAA
 
Protein sequence
MPNASVVSAA LQTLVYGGAA SYGLYNSLFN VEGGHRAIVY NRFVGVKDKV YAEGTHFMIP 
WVERPYVYDV RARAHQVNSQ SGSRDLQMVN ISIRVLTRPD AGKLPEVYRT LGMDFNERVL
PSVIHETVKS VVAQHNASEL ITKREQVSLS IRHLLKQRAA QFNMVLDDVS LTALTFGREY
TAAIESKQVA QQEAERAKFV VDKARQDKLS AVIQAEGEAK SAKLIGEAIA NNPAFLTLRK
IEAARAIAQT MANSNNRVML SADSLLLNLQ DDKPADKK