Gene OSTLU_29356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_29356 
Symbol 
ID5006712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp101631 
End bp102155 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content66% 
IMG OID640422133 
Productpredicted protein 
Protein accessionXP_001422482 
Protein GI145356532 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCC CGAGCAAGGC GTGCGCGACG CGGCTCACGC GCGAGCTCAG GCAGTTCCGC 
GCCGCGCCGC CGCCGCTCGC GCCCAGGGTG CACGTCGACG ACGGCGACCT CCTCGAGTGG
TTCGTCCTGA TCCAGGGCGC GCACGACACG CCGTACGAGC GCGGTTGGTA CGTGATGAAG
ATTAAGTTCA AGCCGACGTA TCCGTTCGCG GCGCCCGCTG TGAGCGTTCT GACGCCGAAC
GGACGGTTCG CGGAGAATCA GTCGATATGC ATGTCGATGA CGGAGTGGCA TCAGGAGAGC
TGGAACCCGG CGTGGTCGTC GCAGGCGATC GTGACGGGAT TCATCAGTTT CATGAGCGCA
AACGAGCACA CGAGCGGAGG GGTGCGGACG ACGGACGAGG AGAAGAAGCG ATTGGCGGCG
GCGTCGCTGG CGTGGAACGC GGCGCAGCCA GGATTGGTGA AGAAGTTTCC AGAGCTGGCG
GACGCGGAAG CGATGAAGGC GTTGGAGACG GCGAAGCCGA GGTGA
 
Protein sequence
MAPPSKACAT RLTRELRQFR AAPPPLAPRV HVDDGDLLEW FVLIQGAHDT PYERGWYVMK 
IKFKPTYPFA APAVSVLTPN GRFAENQSIC MSMTEWHQES WNPAWSSQAI VTGFISFMSA
NEHTSGGVRT TDEEKKRLAA ASLAWNAAQP GLVKKFPELA DAEAMKALET AKPR