| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25819 |
|---|
| Symbol | |
|---|
| ID | 5006512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 24613 |
|---|
| End bp | 28060 |
|---|
| Gene Length | 3448 bp |
|---|
| Protein Length | 1130 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421933 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422454 |
|---|
| Protein GI | 145356474 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5593] Nucleic-acid-binding protein possibly involved in ribosomal biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCAC CGTCCGAACC CGCGCCCGAG CTCGAGGCCG ACGTCAAGGC GTACGCCTCG
TCTCTTGGGT TCGCTCCTCG CGCGAGCGAC GGCGCCGTCA CCCGCGGCTT CGACGACCGA
GACTTCCGCG CGGAACACTT GAGAAAGAAG GAGGCGGCGG CGGCGCGGCG CGCGAAAGAA
AAGTCATCGA CGACGCGCGA GGACGACGCG CGAGACGACG GCGAGCGCGG CAGAGGAAAG
AAACGCGCGC AGACGAACGA TGCTCGCGCG AACGCGTCAC AAAAAGCGAC GCGGGACAAG
GCAAACGATG GGAAGAAGAC GTCGCGGGAC GACGGCGACG GCGACGGCGA CGGCGACGCG
GCGGCTCGAG AGCGGCCGTC GGGAAAGAAA CGACCGTGGA ATCCAGGGGC GGGGCCTATG
CCGAGTAAAG GCGATGTAAA GGGAGGTAAA TCGAATCGCG ATGGTGGTGC GAATGCGAGC
GCGTCGGGGG GGGCGTGGTA CGAGGCGAGC GAGGCTTTGG ACGCCGAACT CGGGAGCGCT
GGCAAGCGCG GGAAATCCAA GTCGGAACCG ACGCGCGGTG AGCTGGAAGA GAAGGAACGC
ATGGCGAAGA ATGCGCTAGA AGATCGAGTG AACACGTACG CCAAACGCAT GCAGCGACAC
AGCGATGCAA ACGCGAAATG GTTGGAGATG GTTCGCACAA ACGGTACGGC GAGCGATAAA
GTAGCCGCCA ACGTGTTGAG CGTGACCGAG GACCCAGCGG CGAACTTGAA AGCGCTGGAG
AATTTACTAG GAATCGTCGA ACGCGCTCGA GCGAGTGGGG GCAAACGTGG GGCTGTGCAA
TCGATCACCG CGCTCGAGAC GTTGTTTCGG GAAAGCCTGC TCCCCGATCG AAAGCTGCGA
TATTTTAGCG AACAGCCCCT CTCGGTGGCG GCGAGTGCCC CGCACGAACG CAAGCGATTG
ATGTACTGGT ACGTCGAAGA CTCTATTAAG CGTATGTACT TGCGGTTCAT TGCGGCTTTG
GATGAGTTAT CTCGAGATCC TTTGCCGATT CTCAAGGAAA AGTCTTTGAA GAGCGCGTAC
GCACTACTCA AATCCAAACC CGAAGGCGAG CGTCAGTTGT TGAACATAAT GGTCAACAAA
CTCGGCGATC CGTCGAGAAA AATCGCATCC AGCGCGTCGT ATTTGTGTTT AGAGCTCATC
AAGGCGCACC CTGCGATGAA GCGCATCGTC GCACGAGAGG TGGAAGCGTT CACGTTTCGA
AGAGGCGTGG GATTGAAGGC GCAGTACTAC GCCGCGGTGA TGATGAATCA AATTCCTCTC
GGGCACAAGG GCGATGGACC GGCGTTGGCT GAGCAGCTCA TCGAGGCGTA CTTTGGATTG
TTTCAGTATT TGTACAATTT GTCGCTGAAG AAAGATCCCG CGAAAGAAGA AGAGGCTAAG
CCCGAGGTGA AGAAGAAGGA CAAAAAACGT CATCGAGACG GTGGCCGGGG TCGCGGCGGT
CGCGGCGGTC GCGGCGGTCG CGGTGGCCGT GGACGCGGTG GTAAGGATAG CAACAAACCA
ACACAACCAG TGCAAATCGG TGCAGGCGTT GACGCTCGAG TCGTCTCCGC CTTACTCACG
GGAATCAATC GCGCGTTTCC GTACGTGGCG AGCGAAAAAA TGGACGCTCT CATCGATCGC
ATCTCTCCCG CCTTGTTCAC TATTGCGCAC TCTCCAAATC TCAGTGGGGC GTTGCAAGCG
ATGATGTTGC TATTTCAGTT GCTATCGGCT CGTTCATCAG TGAGCGATCG ATATTATCGC
GCACTGTACG CCTTGCTGTT GCATCCGGGA CTGTTGCGAT CGGCGAACAA TGCGCAAGTA
TTATCGCTTA TTTTCAAGAG CTTGCGCGAG GACGTCGTTC CGAAGCGCTC GGCGGCGATG
GTGAAACGTT TGTTACAAGT GGCTTCGCAA GCACCGGCTA CGTTCGCGTG CGGTGCGCTC
ATGGCGGTTA GTGAGTTTTT GTCGAAGCAG CCTTCGCACT GGAACGCCAT TCGAGTACCG
CGAGAGACTG AAGAGGATGG CGTCGAGCAC TTCAGCGACG TCAGAGACGA CGAAGACGAA
ACAAACGAAG GGACTGGGTT GTTTGAGGGC GATAAAACGA CGGAAAGAAC GCCCAAAGCG
ACGAAAAGTG ACAGCGAAAA GTCCTCAGAT GATGACGAGG ATGCCGACCA AGCCAACGCC
GTCGATGGCG AAAAAGGCTC GAACCGAGTC GGCGGGCCGA GCGAGCGATA CGACATGGAG
AAGCGAGAGC CCATGTACGC GCGCGCGGAA ACTTCGTGCT GGTGGGAACT CAATGTTCTC
GCCGCGAACG CTCACCCGTC AGTCTCCGCG ATGTCCCGCA CTTTGCTCGA AGGCAAGCCA
ATTGAATACG ACGGCGATCC TCTCTCTGAC ATGACGCTCA CCGTGTTCCT TGACAAATGG
TTGCAGAAGA AGCCGAAGAA AAGATCCAAG GGTGGTTCTC TAGTCATGCG AGCGTTGGAA
TCCGACGCGA GCGCGGCGTA CATGCCCGGC ACGGACGAAT TTGCGTCGCT CATGGAGTCC
GAAGTTGACC CTTCCGACGT CTTCTTTCAT CGCTACTTTG CCAACAAGAC GGAGAAGGCG
GCGGCGAAGA AGAAAAAGGC GGACAAGAAA ACGACAGACG ACGACGACCA GGCAGAATCC
GAGTCAGATG CCGACGGCGA GCTCCCGAAG AAGAAATTCG ACGACAGCGA ATCCGAAGGC
GACGACAGCG AAGACGAACT CGCGGTGGAG GAAATCAACA TCAACGACGC CTCCGACTCG
GAGGACGACG AAGAGCTCGC GATTCCACTC AAGAAGATCC GCAAGAACGA TTTCAAGGAG
GATAGCGACG ACGCCGCGGA CGAAGAGTTC GGCAAGTCTG AGCGCCAGGA AGAAGCGATC
GAAGACGAGC GATACGATTT GGACGCCTTC GCGGCGGCGT ACGGCAGACA ACCCGGGTAC
TTGATTCGCG AAGCCGCAGA GCGCGAGAGA GCGGCGGAAG CGAAGGCGAT CGAGGCGATC
AAACGCGCGG TTCAGCGCAC GCCCACGGGT GCAAACGATG AAGACACCAT CGACGACGAC
TTTACCGCCG GCGGCGTCTT CGCCTCGGCC GAAGAATACG AAACCATGAT CAACACCGAC
GCCGTCAACG CCGTGGATCC GAACAAGCTC GACGACGACG AAGCCGACGA CGAGGAAGCT
GACATCGAAG TCAACGACGA CGACGACGAC GACGACGACG ACGACGACGA CGACGACGAC
GAGCCATCGC CGCCACCATC GAAAAAGACC AAACCGTCTC CGTCGTCGTC CTCGAAGAAG
ACGTCCGAGC GCCGTCGCTC GCGCGCCGAA TAGCGCCGCG ACGTCCGCGT CGAATCGTGT
AGTCACTCCG CGTCGTTACG CGGCGTAG
|
|---|
| Protein sequence | MAPPSEPAPE LEADVKAYAS SLGFAPRASD GAVTRGFDDR DFRAEHLRKK EAAAARRAKE
KSSTTREDDA RDDGERGRGK KRAQTNDARA NASQKATRDK ANDGKKTSRD DGDGDGDGDA
AARERPSGKK RPWNPGAGPM PSKGDVKGGK SNRDGGANAS ASGGAWYEAS EALDAELGSA
GKRGKSKSEP TRGELEEKER MAKNALEDRV NTYAKRMQRH SDANAKWLEM VRTNGTASDK
VAANVLSVTE DPAANLKALE NLLGIVERAR ASGGKRGAVQ SITALETLFR ESLLPDRKLR
YFSEQPLSVA ASAPHERKRL MYWYVEDSIK RMYLRFIAAL DELSRDPLPI LKEKSLKSAY
ALLKSKPEGE RQLLNIMVNK LGDPSRKIAS SASYLCLELI KAHPAMKRIV AREVEAFTFR
RGVGLKAQYY AAVMMNQIPL GHKGDGPALA EQLIEAYFGL FQYLYNLSLK KDPAKEEEAK
PEVKKKDKKR HRDGGRGRGG RGGRGGRGGR GRGGKDSNKP TQPVQIGAGV DARVVSALLT
GINRAFPYVA SEKMDALIDR ISPALFTIAH SPNLSGALQA MMLLFQLLSA RSSVSDRYYR
ALYALLLHPG LLRSANNAQV LSLIFKSLRE DVVPKRSAAM VKRLLQVASQ APATFACGAL
MAVSEFLSKQ PSHWNAIRVP RETEEDGVEH FSDVRDDEDE TNEGTGLFEG DKTTERTPKA
TKSDSEKSSD DDEDADQANA VDGEKGSNRV GGPSERYDME KREPMYARAE TSCWWELNVL
AANAHPSVSA MSRTLLEGKP IEYDGDPLSD MTLTVFLDKW LQKKPKKRSK GGSLVMRALE
SDASAAYMPG TDEFASLMES EVDPSDVFFH RYFANKTEKA AAKKKKADKK TTDDDDQAES
ESDADGELPK KKFDDSESEG DDSEDELAVE EININDASDS EDDEELAIPL KKIRKNDFKE
DSDDAADEEF GKSERQEEAI EDERYDLDAF AAAYGRQPGY LIREAAERER AAEAKAIEAI
KRAVQRTPTG ANDEDTIDDD FTAGGVFASA EEYETMINTD AVNAVDPNKL DDDEADDEEA
DIEVNDDDDD DDDDDDDDDD EPSPPPSKKT KPSPSSSSKK TSERRRSRAE
|
|---|
| |