| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_19134 |
|---|
| Symbol | |
|---|
| ID | 5006670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 508779 |
|---|
| End bp | 510032 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640422091 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422612 |
|---|
| Protein GI | 145356797 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTG TGCCCGTCGG CGACGCGAGC GGTTGGAGCG CGGCGTTGTT GCGATACAAG
GCCAAGGAAG GCGTGGAGAC GCGAAGACCG ATCGTCATGG TGCCCGGATG CGCGTCAAAC
GGGATGACAT TTGATGTCGA TAAGACGGTG AGCTTACCCA GGTATCTCAC GGAGCGCGGG
CACGAGGTTT GGATCGTGGA GACGCGCGGC GTCGGGTACG CGCGCAGATG GACGAGACCG
AGGTCGGATT ACGTCGAGGT CGCGCCGCCG ACGGACTCGG TCGGCGAAGG AAGCGGTGGT
GGAATAGAAA TACCGATGAT GCGATCGGTG GGATTCGGGC TCTGGGACTT CGACACGCTG
TTGAATGAAG ATTTGTTTTG CTCGTGCGAG TACATCGCCG AAGTCTGTCG CCGTGGGGAT
TTGGCGGGCG TCGGGCATTC GATGGGTGGA ATGCTCCTCG CCTCGCTTGC GGCCGTAGGA
CCGAAAGAAA GCGACATCGG GGTGAATTGT TCGTGGTCCA TGACTCGCGT GTGCACGATG
GCGTCGTGTT TGGAATGTTC CTCGGAGAGC GACCCGGAAT CGCCGGCGTC GGTGTACGCG
CGTTTCGCCG CCTTGGCGGG CCATCTCCCG CGAGGACTCA CCGCGAATCC GAGCACGACC
ACCGTGCACT TACCAATAGC GCCCGCAAGC GTAGCCACCG CGGAGGCGTT TCAATTCGTG
CTCGGTCCAC CGCCTCCCAT CGACGGCGAC GGCGCGTCGG CGCCCGATCC CGCCAAGGCG
TTTTGGAGAA ATTCAGTCTC CCCGGTGACG TGCCATCCCG GCGCCACGGA CTCGGAATTC
CTTCGACGAC TACTATTACG AGGCTTCAAC AACGTCCCAT TGTCGTTGCT GATTCAAATG
GCAACACTGT TCACTCCCGG AGGCATGCGC AGCCGCGACC CATCCATGGG CGTCGACGAA
TCGTCGAGCG TGCGCGCCAG AATCGCTCGA GACAGCGAAC GATTAAAGTA CCTCGACGAG
CTCCAGCGCG CGCGCGTGCC TGTTCTCGCC ATCGCCGGGG ACGTGGACCC GATTTTTCCC
CCGAACCAAG TCAAAGCGTA CGCCAGAAAA GTAGACGCCG AGTACCACGT CTTCGGCGAC
GCGTCGTCGC CGCGCGACGA CCCGGACACC CATTACAGCC ACTACGACGT CATCTGTGGC
CGACACGCCC CTCACAAAGT CTTCCCCATA GTCGCCGAGT TTCTCGAGCG CTGA
|
|---|
| Protein sequence | MHFVPVGDAS GWSAALLRYK AKEGVETRRP IVMVPGCASN GMTFDVDKTV SLPRYLTERG
HEVWIVETRG VGYARRWTRP RSDYVEVAPP TDSVGEGSGG GIEIPMMRSV GFGLWDFDTL
LNEDLFCSCE YIAEVCRRGD LAGVGHSMGG MLLASLAAVG PKESDIGVNC SWSMTRVCTM
ASCLECSSES DPESPASVYA RFAALAGHLP RGLTANPSTT TVHLPIAPAS VATAEAFQFV
LGPPPPIDGD GASAPDPAKA FWRNSVSPVT CHPGATDSEF LRRLLLRGFN NVPLSLLIQM
ATLFTPGGMR SRDPSMGVDE SSSVRARIAR DSERLKYLDE LQRARVPVLA IAGDVDPIFP
PNQVKAYARK VDAEYHVFGD ASSPRDDPDT HYSHYDVICG RHAPHKVFPI VAEFLER
|
|---|
| |